Chlorophyll content estimation based on cascade spectral optimizations of interval and wavelength characteristics

Abstract

Spectroscopy is an efficient way to estimate the chlorophyll content of crop canopy in the visible and near-infrared region to indicate the photosynthesis capacity and growth status. Although hyperspectral data of crop canopy provide a lot of information, a critical issue is that the subsequent redundant and interference wavelengths could reduce the accuracy and robustness of the estimated results in the field. Therefore, a cascade method of interval-wavelength screening was proposed to reduce the data dimension and improve the crop estimation accuracy and robustness for the chlorophyll content diagnosis of maize crops. In the experiments, spectral reflectance data of maize canopy within 325–1075 nm were obtained, and chlorophyll contents were measured under the conditions of six nitrogen application rates and three growth periods following the early flaring, flaring, and tasseling stages. First, the backward interval partial least squares (BiPLS) method was used to optimize the spectrum interval. Then, competitive adaptive reweighted sampling (CARS) and genetic algorithm (GA) were used for secondary wavelength screening, and the partial least squares regression (Bi-CARS-PLSR and Bi-GA-PLSR) model was established with the chlorophyll content. Compared with the full-spectrum modeling (Full-PLSR) results and the GA and CARS screening wavelength modeling (Full-CARS-PLSR and Full-GA-PLSR) results in the full-spectrum range, the number of wavelengths in the Full-PLSR model was 751. The accuracy of the Full-PLSR model with the coefficient of determination was 0.88 for the calibration set (Rc2) and 0.66 for the verification set (Rv2). The root mean square error (RMSE) was 2.05 mg/L. The wavelength numbers of Full-CARS-PLSR and Full-GA-PLSR were 125 and 99, and their Rc2 and Rv2 were 0.88 and 0.67, respectively. The RMSE values of Full-CARS-PLSR and Full-GA-PLSR were 2.04 and 1.89 mg/L, respectively. By using the proposed cascade method, the wavelength numbers of the Bi-CARS-PLSR model and Bi-GA-PLSR model after interval optimization were 60 and 49, respectively. Their accuracy values for the calibration set (Rc2) were both 0.87, while those for the verification set (Rv2) were 0.7 and 0.78, respectively. The RMSE values of both models were 1.97 and 1.86 mg/L, respectively. The results showed that the proposed cascaded interval-wavelength screening method could eliminate redundant and collinearity variables and improve model performances. At the same time, the Bi-GA-PLSR modeling result was used for field prediction to establish a chlorophyll distribution map, which had a high consistency with the real chlorophyll distribution, and showed the potential to detect chlorophyll content of maize in the field.