Abstract

Abstract. Regions in the Amazon Basin have been associated with specific biogeochemical processes, but a detailed chemical classification of the abundant and ubiquitous dissolved organic matter (DOM), beyond specific indicator compounds and bulk measurements, has not yet been established. We sampled water from different locations in the Negro, Madeira/Jamari and Tapajós River areas to characterize the molecular DOM composition and distribution. Ultrahigh-resolution Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR-MS) combined with excitation emission matrix (EEM) fluorescence spectroscopy and parallel factor analysis (PARAFAC) revealed a large proportion of ubiquitous DOM but also unique area-specific molecular signatures. Unique to the DOM of the Rio Negro area was the large abundance of high molecular weight, diverse hydrogen-deficient and highly oxidized molecular ions deviating from known lignin or tannin compositions, indicating substantial oxidative processing of these ultimately plant-derived polyphenols indicative of these black waters. In contrast, unique signatures in the Madeira/Jamari area were defined by presumably labile sulfur- and nitrogen-containing molecules in this white water river system. Waters from the Tapajós main stem did not show any substantial unique molecular signatures relative to those present in the Rio Madeira and Rio Negro, which implied a lower organic molecular complexity in this clear water tributary, even after mixing with the main stem of the Amazon River. Beside ubiquitous DOM at average H ∕ C and O ∕ C elemental ratios, a distinct and significant unique DOM pool prevailed in the black, white and clear water areas that were also highly correlated with EEM-PARAFAC components and define the frameworks for primary production and other aspects of aquatic life.

Highlights

  • With an average of about 200 000 m3 s−1 and ∼ 20 % of the global freshwater discharge, the Amazon River transports larger amounts of riverine freshwater into the ocean than the seven biggest river systems on Earth combined

  • We investigated the chemodiversity of these three water types across the Amazon Basin by employing non-target Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS) interfaced with soft electrospray ionization (ESI), which has enabled the characterization of thousands of individual molecular ions in complex Dissolved organic matter (DOM) mixtures (Gonsior et al, 2011, 2013; D’Andrilli et al, 2010; Tremblay et al, 2007; Ward et al, 2013; Hertkorn et al, 2013; Liu et al, 2011; Stubbins et al, 2010; Stenson et al, 2003)

  • We attempted to answer the following questions. (a) What is the overall chemodiversity of DOM in the Amazon Basin, and do distinct differences in DOM composition exist between major Amazon tributaries and the flooded area? (b) How well do the simple optical properties represent the overall molecular composition of DOM as described by FT-ICR-MS in tropical ecosystems? Satisfactory comprehension of these relationships would have large implications for the understanding of aquatic food webs and for predicting further transport and processing of DOM in the Amazon

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Summary

Introduction

With an average of about 200 000 m3 s−1 and ∼ 20 % of the global freshwater discharge, the Amazon River transports larger amounts of riverine freshwater into the ocean than the seven biggest river systems on Earth combined. We investigated the chemodiversity of these three water types across the Amazon Basin by employing non-target Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS) interfaced with soft electrospray ionization (ESI), which has enabled the characterization of thousands of individual molecular ions in complex DOM mixtures (Gonsior et al, 2011, 2013; D’Andrilli et al, 2010; Tremblay et al, 2007; Ward et al, 2013; Hertkorn et al, 2013; Liu et al, 2011; Stubbins et al, 2010; Stenson et al, 2003) By combining this technique with advanced optical characterization, excitation emission matrix (EEM) fluorescence spectroscopy and parallel factor analysis (PARAFAC), we assess similarities and differences in DOM composition between different waters of the Amazon Basin. We attempted to answer the following questions. (a) What is the overall chemodiversity of DOM in the Amazon Basin, and do distinct differences in DOM composition exist between major Amazon tributaries and the flooded area? (b) How well do the simple optical properties represent the overall molecular composition of DOM as described by FT-ICR-MS in tropical ecosystems? Satisfactory comprehension of these relationships would have large implications for the understanding of aquatic food webs and for predicting further transport and processing of DOM in the Amazon

Materials and methods
Solid-phase extraction
Ultrahigh-resolution mass spectrometry
Excitation emission matrix fluorescence and parallel factor analysis
Multivariate statistical analysis
Results and discussion
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