Abstract

BackgroundThe chromodomain helicase DNA binding domain (CHD) proteins modulate gene expression via their ability to remodel chromatin structure and influence histone acetylation. Recent studies have shown that CHD2 protein plays a critical role in embryonic development, tumor suppression and survival. Like other genes encoding members of the CHD family, pathogenic mutations in the CHD2 gene are expected to be implicated in human disease. In fact, there is emerging evidence suggesting that CHD2 might contribute to a broad spectrum of neurodevelopmental disorders. Despite growing evidence, a description of the full phenotypic spectrum of this condition is lacking.MethodsWe conducted a multicentre study to identify and characterise the clinical features associated with haploinsufficiency of CHD2. Patients with deletions of this gene were identified from among broadly ascertained clinical cohorts undergoing genomic microarray analysis for developmental delay, congenital anomalies and/or autism spectrum disorder.ResultsDetailed clinical assessments by clinical geneticists showed recurrent clinical symptoms, including developmental delay, intellectual disability, epilepsy, behavioural problems and autism-like features without characteristic facial gestalt or brain malformations observed on magnetic resonance imaging scans. Parental analysis showed that the deletions affecting CHD2 were de novo in all four patients, and analysis of high-resolution microarray data derived from 26,826 unaffected controls showed no deletions of this gene.ConclusionsThe results of this study, in addition to our review of the literature, support a causative role of CHD2 haploinsufficiency in developmental delay, intellectual disability, epilepsy and behavioural problems, with phenotypic variability between individuals.

Highlights

  • The chromodomain helicase DNA binding domain (CHD) proteins modulate gene expression via their ability to remodel chromatin structure and influence histone acetylation

  • In order to investigate the role of CHD2 haploinsufficiency in neurodevelopmental disorders, we describe the first series of patients with deletions affecting CHD2 from among a cohort of 42,313 patients broadly ascertained by clinical genetics laboratories to have developmental delay, intellectual disability, multiple congenital anomalies and/ or autism spectrum disorder (ASD)

  • Conclusions we describe the first series of patients with deletions affecting CHD2

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Summary

Introduction

The chromodomain helicase DNA binding domain (CHD) proteins modulate gene expression via their ability to remodel chromatin structure and influence histone acetylation. The chromodomain helicase DNA binding (CHD) proteins belong to the SNF2-related superfamily of ATPases, which use the energy from ATP hydrolysis to change nucleosome positioning, composition and chromatin structure. The CHD family is defined by the presence of tandem chromo (chromatin organisation modifier) domains in the N-terminal region and a central SNF2-related helicase/ATPase domain [4]. The latter is the catalytic core mediating chromatin alteration. Exome sequencing studies have shown loss of function mutations affecting one allele of CHD8 to be associated with autism spectrum disorder (ASD) [6,7,8]

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