Abstract

Rhizobium lipopolysaccharide (LPS) contains four terminally linked galacturonic acid (GalA) residues; one attached to the lipid A and three attached to the core oligosaccharide moiety. Attachment of the GalA residues requires the lipid donor dodecaprenyl-phosphate GalA (Dod-P-GalA), which is synthesized by the GalA transferase RgtE reported here. The galacturonosyl transferases RgtA, -B, and -C utilize Dod-P-GalA to attach GalAs on the LPS core region, and RgtD attaches GalA to the lipid A 4' position. As reported here, the functions of the rgtD and rgtE genes were determined via insertion mutagenesis and structural characterization of the mutant lipid A. The rgtE(-) mutant lacked Dod-P-GalA as determined by mass spectrometry of total lipid extracts and the inability of rgtE(-) mutant membranes to provide the substrate for heterologously expressed RgtA activity. In addition, we created single mutations in each of the rgtA, -B, -C, -D, and -E genes to study the biological function of the GalA residues. The structures of the core oligosaccharide region from each of the rgt mutants were elucidated by glycosyl linkage analysis. Each mutant was assayed for its sensitivity to sodium deoxycholate and to the antimicrobial cationic peptide, polymyxin B (PmxB). The rgt mutants were more sensitive than the parent strain to deoxycholate by varying degrees. However, the rgtA, -B, and -C mutants were more resistant to PmxB, whereas the rgtD and E mutants were less resistant in comparison to the parent strain.

Highlights

  • The rgtD gene is found in the genomes of a number of R. etli and R. leguminosarum strains including R. etli CE3/CFN42, R. etli CIAT652, R. leguminosarum bv. viciae 3841, and R. leguminosarum bv. trifolii WSM1325

  • The proteins are predicted bacterial dolichol-like phosphate mannosyl type 2 glycosyl transferases and are of similar sizes containing two predicted C-terminal transmembrane domains that likely tether the proteins to the inner membrane, whereas the catalytic portion resides on the inner membrane/cytoplasm interface

  • To study the functions of these galacturonic acid (GalA) residues with regard to LPS synthesis, symbiosis, pathogenesis, and bacterial physiology, it was necessary to identify and disrupt each of the genes that encode for the various galacturonic acid transferase (GalAT) that add these GalA residues to the LPS

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Summary

Background

The galacturonosyl transferases RgtA, -B, and -C utilize Dod-P-GalA to attach GalAs on the LPS core region, and RgtD attaches GalA to the lipid A 4؅ position. Three galacturonic acid transferase (GalAT) enzymes RgtA, -B, and -C were previously shown in an in vitro assay to transfer GalA from Dod-P-GalA to the synthetic substrate Man-Kdo2[4Ј-32P]lipid IVA [3, 4]. These results demonstrated that the GalATs RgtA and RgtB attach GalA to the branching Kdo likely at the 4 and 5 positions.

The abbreviations used are
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