Abstract

BackgroundSulfide is a common toxin to animals and is abundant in coastal and aquatic sediments. Sulfur dioxygenase (SDO) is thought to be the key enzyme involved in sulfide oxidation in some organisms. The echiuran worm, Urechis unicinctus, inhabits coastal sediment and tolerates high concentrations of sulfide. The SDO is presumably important for sulfide tolerance in U. unicinctus.ResultsThe full-length cDNA of SDO from the echiuran worm U. unicinctus, proven to be located in the mitochondria, was cloned and the analysis of its sequence suggests that it belongs to the metallo-β-lactamase superfamily. The enzyme was produced using an E. coli expression system and the measured activity is approximately 0.80 U mg protein−1. Furthermore, the expression of four sub-segments of the U. unicinctus SDO was accomplished leading to preliminary identification of functional domains of the enzyme. The identification of the conserved metal I (H113, H115, H169 and D188), metal II (D117, H118, H169 and H229) as well as the potential glutathione (GSH) (R197, Y231, M279 and I283) binding sites was determined by enzyme activity and GSH affinity measurements. The key residues responsible for SDO activity were identified by analysis of simultaneous mutations of residues D117 and H118 located close to the metal II binding site.ConclusionThe recombinant SDO from U. unicinctus was produced, purified and characterized. The metal binding sites in the SDO were identified and Y231 recognized as the mostly important amino acid residue for GSH binding. Our results show that SDO is located in the mitochondria where it plays an important role in sulfide detoxification of U. unicinctus.

Highlights

  • Sulfide, a common toxin, may be harmful for organisms by reducing the affinity of hemoglobin to oxygen [1], inhibiting the activity of cytochrome c oxidase and succinate oxidase complexes [2,3], depolarizing mitochondria [4], inducing apoptosis [5], and causing oxidative damage to RNA and DNA [6]

  • Our results show that Sulfur dioxygenase (SDO) is located in the mitochondria where it plays an important role in sulfide detoxification of U. unicinctus

  • The conserved metal I (H113, H115, H169 and D188), metal II (D117, H118, H169 and H229) and potential GSH (R197, Y231, M279 and I283) binding sites are indicated in the amino acid sequence

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Summary

Introduction

A common toxin, may be harmful for organisms by reducing the affinity of hemoglobin to oxygen [1], inhibiting the activity of cytochrome c oxidase and succinate oxidase complexes [2,3], depolarizing mitochondria [4], inducing apoptosis [5], and causing oxidative damage to RNA and DNA [6]. At present, the function of ETHE1 is mostly focused in its SDO activity and the biochemical characterization and kinetic properties of the human enzyme shows a Michaelis constant (KM) for GSSH of 0.3460.03 mM and a Vmax of 11364 mmol min 21 mg protein 21 [15]. Sulfur dioxygenase (SDO) is thought to be the key enzyme involved in sulfide oxidation in some organisms. The echiuran worm, Urechis unicinctus, inhabits coastal sediment and tolerates high concentrations of sulfide. The SDO is presumably important for sulfide tolerance in U. unicinctus

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