Abstract

Vaccines derived from chimpanzee adenovirus Y25 (ChAdOx1), human adenovirus type 26 (HAdV-D26), and human adenovirus type 5 (HAdV-C5) are critical in combatting the severe acute respiratory coronavirus 2 (SARS-CoV-2) pandemic. As part of the largest vaccination campaign in history, ultrarare side effects not seen in phase 3 trials, including thrombosis with thrombocytopenia syndrome (TTS), a rare condition resembling heparin-induced thrombocytopenia (HIT), have been observed. This study demonstrates that all three adenoviruses deployed as vaccination vectors versus SARS-CoV-2 bind to platelet factor 4 (PF4), a protein implicated in the pathogenesis of HIT. We have determined the structure of the ChAdOx1 viral vector and used it in state-of-the-art computational simulations to demonstrate an electrostatic interaction mechanism with PF4, which was confirmed experimentally by surface plasmon resonance. These data confirm that PF4 is capable of forming stable complexes with clinically relevant adenoviruses, an important step in unraveling the mechanisms underlying TTS.

Highlights

  • The ChAdOx1 viral vector, adapted from chimpanzee adenovirus Y25 (ChAd-Y25), is the basis for the ChAdOx1 nCoV-19 vaccine (AZD1222/Vaxzevria) [1]

  • As in other adenovirus structures solved by single-particle cryo–electron microscopy, local resolution is higher on the more ordered interior of the capsid while the flexible components on the capsids’ exterior result in less resolved signal

  • We have resolved the capsid structure of the ChAdOx1 viral vaccine vector to a resolution of 3.07 Å, the highest reported resolution of an adenovirus capsid to date

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Summary

Introduction

The ChAdOx1 viral vector, adapted from chimpanzee adenovirus Y25 (ChAd-Y25), is the basis for the ChAdOx1 nCoV-19 vaccine (AZD1222/Vaxzevria) [1]. Following intravenous administration of human adenovirus type 5 (HAdV-C5), studies uncovered important in vivo interactions including high-affinity interactions with coagulation factor X (FX) and/or platelets. These interactions contribute to vector degradation and, to reduced therapeutic index [12,13,14]. This knowledge drove the field to develop adenoviral vectors with low seroprevalence, including ChAdOx1 and HAdV-D26, and engineering of capsid proteins to overcome these issues [15]

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