Abstract

BackgroundLike all viruses, HIV-1 relies on host systems to replicate. The human purinome consists of approximately two thousand proteins that bind and use purines such as ATP, NADH, and NADPH. By virtue of their purine binding pockets, purinome proteins are highly druggable, and many existing drugs target purine-using enzymes. Leveraging a protein affinity media that uses the purine-binding pocket to capture the entire purinome, we sought to define purine-binding proteins regulated by HIV-1 infection.ResultsUsing purinome capture media, we observed that HIV-1 infection increases intracellular levels of fatty acid synthase (FASN), a NADPH-using enzyme critical to the synthesis of de novo fatty acids. siRNA mediated knockdown of FASN reduced HIV-1 particle production by 80%, and treatment of tissue culture cells or primary PBMCs with Fasnall, a newly described selective FASN inhibitor, reduced HIV-1 virion production by 90% (EC50 = 213 nM). Despite the requirement of FASN for nascent virion production, FASN activity was not required for intracellular Gag protein production, indicating that FASN dependent de novo fatty acid biosynthesis contributes to a late step of HIV-1 replication.ConclusionsHere we show that HIV-1 replication both increases FASN levels and requires host FASN activity. We also report that Fasnall, a novel FASN inhibitor that demonstrates anti-tumor activity in vivo, is a potent and efficacious antiviral, blocking HIV-1 replication in both tissue culture and primary cell models of HIV-1 replication. In adults, most fatty acids are obtained exogenously from the diet, thus making FASN a plausible candidate for pharmacological intervention. In conclusion, we hypothesize that FASN is a novel host dependency factor and that inhibition of FASN activity has the potential to be exploited as an antiretroviral strategy.

Highlights

  • Like all viruses, human immunodeficiency virus type-1 (HIV-1) relies on host systems to replicate

  • We report that Fasnall, a novel fatty acid synthase (FASN) inhibitor with anti-tumor activity [15] potently reduces HIV-1 production with minimal effects on cellular viability

  • We focused on FASN, owing to its specialized, well-defined cellular function, limited tissue expression [21], and previously reported association with flavivirus replication [22,23,24]

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Summary

Introduction

HIV-1 relies on host systems to replicate. The human purinome consists of approximately two thousand proteins that bind and use purines such as ATP, NADH, and NADPH. Using large-scale CRISPR [1] or siRNA-based screens, several groups have identified host proteins required for replication of West Nile virus (WNV) [2], dengue virus (DENV) [3], hepatitis C virus (HCV) [4], influenza [5], and human immunodeficiency virus type-1 (HIV-1) [6,7,8,9,10] These studies established the range of host proteins that modulate viral replication, and by extension, they highlight the potential to develop antiviral drugs that target host proteins [7, 11]. The current challenge is to identify a host target that when inhibited, it limits viral replication while simultaneously not harming the host

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