Abstract

Three-dimensional correlative light and electron microscopy (3D CLEM) is attaining popularity as a potential technique to explore the functional aspects of a cell together with high-resolution ultrastructural details across the cell volume. To perform such a 3D CLEM experiment, there is an imperative requirement for multi-modal probes that are both fluorescent and electron-dense. These multi-modal probes will serve as landmarks in matching up the large full cell volume datasets acquired by different imaging modalities. Fluorescent nanodiamonds (FNDs) are a unique nanosized, fluorescent, and electron-dense material from the nanocarbon family. We hereby propose a novel and straightforward method for executing 3D CLEM using FNDs as multi-modal landmarks. We demonstrate that FND is biocompatible and is easily identified both in living cell fluorescence imaging and in serial block-face scanning electron microscopy (SB-EM). We illustrate the method by registering multi-modal datasets.

Highlights

  • Correlative light and electron microscopy (CLEM) combine the strengths of fluorescence and electron microscopy and this allows overcoming their respective limitations for cell imaging [1,2,3]

  • The majority of developed CLEM methods are based on the correlation of light microscopy (LM) with 2D images of thin cell sections imaged with transmission electron microscopy (TEM) [13,16,17,19,20,21]

  • Our 3D CLEM workflow begins by seeding Fluorescent nanodiamonds (FNDs) incubated MDA-MB-231 cells over gridded glass-bottom dishes designed for CLEM experiments

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Summary

Introduction

Correlative light and electron microscopy (CLEM) combine the strengths of fluorescence and electron microscopy and this allows overcoming their respective limitations for cell imaging [1,2,3]. The majority of developed CLEM methods are based on the correlation of LM with 2D images of thin cell sections imaged with transmission electron microscopy (TEM) [13,16,17,19,20,21]. These CLEM methods provide very limited information on the z-axis direction, as TEM sections are generally licenses/by/4.0/)

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