Abstract

Recurrent urinary tract infections (rUTI) are a costly clinical problem affecting millions of women worldwide each year. The majority of rUTI cases are caused by uropathogenic Escherichia coli (UPEC). Data from humans and mouse models indicate that some instances of rUTI are caused by UPEC emerging from latent reservoirs in the bladder. Women with vaginal dysbiosis, typically characterized by high levels of Gardnerella and other anaerobes, are at increased risk of UTI. Multiple studies have detected Gardnerella in urine collected by transurethral catheterization (to limit vaginal contamination), suggesting that some women experience routine urinary tract exposures. We recently reported that inoculation of Gardnerella into the bladder triggers rUTI from UPEC bladder reservoirs in a mouse model. Here we performed whole bladder RNA-seq to identify host pathways involved in Gardnerella-induced rUTI. We identified a variety host pathways differentially expressed in whole bladders following Gardnerella exposure, such as pathways involved in inflammation/immunity and epithelial turnover. At the gene level, we identified upregulation of Immediate Early (IE) genes, which are induced in various cell types shortly following stimuli like infection and inflammation. One such upregulated IE gene was the orphan nuclear receptor Nur77 (aka Nr4a1). Pilot experiments in Nur77-/- mice suggest that Nur77 is necessary for Gardnerella exposure to trigger rUTI from UPEC reservoirs. These findings demonstrate that bladder gene expression can be impacted by short-lived exposures to urogenital bacteria and warrant future examination of responses in distinct cell types, such as with single cell transcriptomic technologies. The biological validation studies in Nur77-/- mice lay the groundwork for future studies investigating Nur77 and the Immediate Early response in rUTI.

Highlights

  • In humans, the urinary tract is the second most common site of infection, most frequently by uropathogenic Eschericia coli (UPEC) (Foxman, 2014)

  • We developed a mouse model to determine whether Gardnerella could cause exfoliation in the bladder and uropathogenic Escherichia coli (UPEC) emergence from bladder reservoirs (Gilbert et al, 2017; O’Brien et al, 2020)

  • We performed RNA sequencing (RNA-seq) on whole bladders to identify early host responses to Gardnerella bladder exposure that could contribute to UPEC Recurrent urinary tract infections (rUTI)

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Summary

Introduction

The urinary tract is the second most common site of infection, most frequently by uropathogenic Eschericia coli (UPEC) (Foxman, 2014). Most rUTIs (as many as 82%) are caused by a UPEC strain identical to that of the previous infection (Ejrnaes et al, 2006; Czaja et al, 2009; Luo et al, 2012; Skjot-Rasmussen et al, 2013; Koljalg et al, 2014), even when appropriate antibiotic therapy is given. We hypothesized that Gardnerella could likewise cause bladder epithelial (urothelial) exfoliation and be a trigger of UPEC rUTI from bladder reservoirs in women. This hypothesis was further supported by three clinical observations potentially linking Gardnerella with UTI. Gardnerella can co-aggregate with UPEC in an in vitro biofilm assay (Castro et al, 2016), suggesting possible synergy between these bacterial species

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