Abstract

Recombinant protein production represents a multibillion-dollar market. Therefore, it constitutes an important research field both in academia and industry. The use of yeast as a cell factory presents several advantages such as ease of genetic manipulation, growth at high cell density, and the possibility of post-translational modifications. Yarrowia lipolytica is considered as one of the most attractive hosts due to its ability to metabolize raw substrate, to express genes at a high level, and to secrete protein in large amounts. In recent years, several reviews have been dedicated to genetic tools developed for this purpose. Though the construction of efficient cell factories for recombinant protein synthesis is important, the development of an efficient process for recombinant protein production in a bioreactor constitutes an equally vital aspect. Indeed, a sports car cannot drive fast on a gravel road. The aim of this review is to provide a comprehensive snapshot of process tools to consider for recombinant protein production in bioreactor using Y. lipolytica as a cell factory, in order to facilitate the decision-making for future strain and process engineering.

Highlights

  • Recombinant protein production represents a multibillion-dollar market [1,2]

  • The aim of the present review is to provide a comprehensive snapshot of the already available and future molecular and process tools to consider for recombinant protein production in bioreactor using Y. lipolytica as a cell factory, in order to facilitate decision-making for future strain and process engineering

  • Aside from overexpressed endogenous genes, reactor-scale production by Y. lipolytica has mainly focused on recombinant proteins from fungal origin, some examples of viral [6], bacteria [7,8,9,10,11], vegetal [12,13,14,15], or mammalian [16,17,18,19,20] proteins have been reported over the years

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Summary

Introduction

Recombinant protein production represents a multibillion-dollar market [1,2]. It has been developed as a safer and cost-effective alternative to the extraction of proteins from natural sources. Yeasts combine the characteristics of the former (i.e., simplicity of growth and genetic engineering) and the latter (i.e., protein folding and assembly, post-translational modifications) In this regard, Yarrowia lipolytica stands out as an advantageous host system. Y. lipolytica secretes large amounts of hydrolases, mainly lipases and proteases, to retrieve nutrients necessary to sustain its growth. This goes together with a very efficient secretory pathway [4]. The aim of the present review is to provide a comprehensive snapshot of the already available and future molecular and process tools to consider for recombinant protein production in bioreactor using Y. lipolytica as a cell factory, in order to facilitate decision-making for future strain and process engineering

Recombinant Proteins
Metabolic Load: the Weight of Recombinant Expression on Host Cells
Strains and Plasmids
Copy Number
Promoters: an Inducible Advantage
Unpredictable Dimorphism
The Predominance of Fed-Batch
Culture Medium: a Matter of Definition
Oxygen Supply
Multifaceted Implications of pH
Striking a Balance with Biomass Load
Working Volume
Analytical and Predictive Bioprocess Models
Coupling Recombinant Protein Production with Another Bioprocess
Examples
Low Value Protein
High Value Protein
Findings
Conclusions and Prospects
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