Abstract

Cytoscape: http://www.cytoscape.org http://apps.cytoscape.org Tools PathVisio (ww.pathvisio.org) is an open source pathway tool to edit, visualize and analyse biological pathways. The visualization options are designed to allow highly complex data visualization relevant in pathway analysis. Cytoscape (www.cytoscape.org) is an open source netwok analysis and visualization tool. The visualization mapper provides a wide variety of options to visualize many types of different data on networks. Challenges: In pathways and networks: – Visualization of genetic variation data – Visualization of phosphorylation data – Visualization of methylation data

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