Abstract

BackgroundNumerous studies have favored dispersal (colonization) over vicariance (past fragmentation) events to explain eastern Asian-North American distribution patterns. In plants, however the disjunction between eastern Asia and western North America has been rarely examined using the integration of phylogenetic, molecular dating, and biogeographical methods. Meanwhile, the biogeographic patterns within eastern Asia remain poorly understood. The goldthread genus Coptis Salisb. includes 15 species disjunctly distributed in North America, Japan, mainland China, and Taiwan. We present a dated phylogeny for Coptis under the optimal clock model and infer its historical biogeography by comparing different biogeographic models.ResultsThe split of Coptis and Xanthorhiza Marshall occurred in the middle Miocene (ca. 15.47 Ma). Coptis started their diversification in the early late Miocene (ca. 9.55 Ma). A late Miocene vicariance event resulted in the eastern Asian and western North American disjunction in the genus. Within eastern Asia, dispersals from mainland Asia to Japan and from Japan to Taiwan occurred at ca. 4.85 Ma and at ca. 1.34 Ma, respectively.ConclusionsOur analyses provide evidence that both vicariance and dispersal events have played important roles in shaping the current distribution and endemism of Coptis, likely resulting from eustatic sea-level changes, mountain formation processes and an increasing drier and cooler climate from the middle Miocene onwards.

Highlights

  • Numerous studies have favored dispersal over vicariance events to explain eastern Asian-North American distribution patterns

  • The relationships among Coptis species are well resolved with strong support (PP > 0.95) except for the node defining the sister relationship of C. quinquefolia Miq. and C. morii

  • We present a dated phylogeny for all species of Coptis, a genus of pharmaceutical and economical importance

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Summary

Introduction

Numerous studies have favored dispersal (colonization) over vicariance (past fragmentation) events to explain eastern Asian-North American distribution patterns. Biogeographic studies employing the integration of phylogenetic hypotheses, inference of ancestral ranges, and estimates of divergence times have largely focused on the classic eastern Asian and eastern North American floristic disjunction pattern [5,6,7,8]. Recent molecular phylogenetic studies indicate that the Tertiary relict floras within East Asia could be subdivided into two distinct southern and northern regions [17, 18]. The former consists of southern and southeastern China with extending to the Himalayas, while the latter contains Japan, Korea, and northeastern China.

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