Abstract

RAS-like protein expressed in many tissues 1 (RIT1) is a disease-associated RAS subfamily small guanosine triphosphatase (GTPase). Recent studies revealed that germ-line and somatic RIT1 mutations can cause Noonan syndrome (NS), and drive proliferation of lung adenocarcinomas, respectively, akin to RAS mutations in these diseases. However, the locations of these RIT1 mutations differ significantly from those found in RAS, and do not affect the three mutational "hot spots" of RAS. Moreover, few studies have characterized the GTPase cycle of RIT1 and its disease-associated mutants. Here we developed a real-time NMR-based GTPase assay for RIT1 and investigated the effect of disease-associated mutations on GTPase cycle. RIT1 exhibits an intrinsic GTP hydrolysis rate similar to that of H-RAS, but its intrinsic nucleotide exchange rate is ∼4-fold faster, likely as a result of divergent residues near the nucleotide binding site. All of the disease-associated mutations investigated increased the GTP-loaded, activated state of RIT1 in vitro, but they could be classified into two groups with different intrinsic GTPase properties. The S35T, A57G, and Y89H mutants exhibited more rapid nucleotide exchange, whereas F82V and T83P impaired GTP hydrolysis. A RAS-binding domain pulldown assay indicated that RIT1 A57G and Y89H were highly activated in HEK293T cells, whereas T83P and F82V exhibited more modest activation. All five mutations are associated with NS, whereas two (A57G and F82V) have also been identified in urinary tract cancers and myeloid malignancies. Characterization of the effects on the GTPase cycle of RIT1 disease-associated mutations should enable better understanding of their role in disease processes.

Highlights

  • RAS-like protein expressed in many tissues 1 (RIT1) is a disease-associated RAS subfamily small guanosine triphosphatase (GTPase)

  • A RAS-binding domain pulldown assay indicated that RIT1 A57G and Y89H were highly activated in HEK293T cells, whereas T83P and F82V exhibited more modest activation

  • We examined the effects of these mutations on GTP hydrolysis, beginning with RIT1 Q79L, an engineered mutation of the putative catalytic residue corresponding to RAS Gln-61 [27]

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Summary

Results and Discussion

Developing a RIT1 GTPase Assay—To monitor the GTPase cycle of RIT1 using a real-time NMR assay, 15N-labeled recombinant GTPase domain (residues 17–191) of wild-type RIT1 isoform 2 was expressed and purified. Comparison of the GTPase Cycles of RIT1 and HRAS—First, we compared the intrinsic nucleotide exchange and GTP hydrolysis rates of RIT1 to those of H-RAS, under the same high ionic strength buffer conditions (Fig. 3, A and B). The RIT1 disease-associated mutants investigated in this study exhibited either a faster nucleotide exchange rate, a slower hydrolysis rate, or both (Fig. 4A), strongly suggesting that they would exist in a more highly activated state in vivo. We propose that these mutants can be classified into two groups according to their biochemical properties: fast-exchangers versus slow-hydrolyzers.

B Nucleotide hydrolysis
B RIT1 S35T
B RIT1 WT
Experimental Procedures
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