Abstract
Herpes simplex virus type 1 encodes a heterotrimeric helicase-primase composed of the products of the UL5, UL52, and UL8 genes. UL5 possesses six motifs conserved among superfamily 1 of helicase proteins. Substitutions of conserved residues in each motif abolishes DNA replication in vivo (Zhu, L., and Weller, S. K. (1992) J. Virol. 66, 469-479). Purified UL5.52 harboring a Gly to Ala change in motif V retains primase and helicase activities in vitro but exhibits a higher KM for single-stranded DNA and lower DNA-dependent ATPase activity (Graves-Woodward, K. L., and Weller, S. K. (1996) J. Biol. Chem. 272, 13629-13635). We have purified and characterized six other subcomplexes with residue changes in the UL5 helicase motifs. Each variant subcomplex displays at least wild type or greater levels of primase and DNA binding activities, but all are defective in helicase activity. Mutations in motifs I and II exhibit profound decreases in DNA-dependent ATPase activity. Mutations in motifs III-VI decrease DNA-dependent ATPase activity 3-6-fold. Since mutations in motifs III, IV, V, and VI do not eliminate ATP hydrolysis or DNA binding, we propose that they may be involved in the coupling of these two activities to the process of DNA unwinding. This analysis represents the first comprehensive structure-function analysis of the conserved motifs in helicase superfamily 1.
Highlights
Biochemical Analyses of Mutations in the Herpes simplex virus type 1 (HSV-1) Helicase-Primase That Alter ATP Hydrolysis, DNA Unwinding, and Coupling Between Hydrolysis and Unwinding*
We have previously shown that a Gly to Ala substitution in motif V lowers the ssDNA-dependent ATPase activity of UL51⁄752 and does not dramatically alter primase activity in vitro; surprisingly, this mutant was found to exhibit near wild type levels of helicase activity in vitro [37]
Quantitation of the amount of primer synthesized by each subcomplex in three independent sets of assays revealed that mutations in all of the helicase motifs cause an increase in the primase activity
Summary
Vol 272, No 7, Issue of February 14, pp. 4623–4630, 1997 Printed in U.S.A. Biochemical Analyses of Mutations in the HSV-1 Helicase-Primase That Alter ATP Hydrolysis, DNA Unwinding, and Coupling Between Hydrolysis and Unwinding*. Since mutations in motifs III, IV, V, and VI do not eliminate ATP hydrolysis or DNA binding, we propose that they may be involved in the coupling of these two activities to the process of DNA unwinding. This analysis represents the first comprehensive structure-function analysis of the conserved motifs in helicase superfamily 1. Herpes simplex virus type 1 (HSV-1) encodes a heterotrimeric complex composed of the products of the UL5, UL52, and UL8 genes This protein complex has been shown to possess ssDNA-dependent ATPase, 5Ј to 3Ј DNA helicase, and RNA primase activities (20 –23). Mutations in motifs III, IV, V, and VI do not eliminate ATP hydrolysis nor affect DNA binding and may be involved in the coupling of these two activities to the process of DNA unwinding
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