Abstract

Members of the genus Bifidobacterium are among the first microbes to colonize the human gastrointestinal tract and are believed to exert positive health benefits on their host. Due to their purported health-promoting properties, bifidobacteria have been incorporated into many functional foods as active ingredients. Bifidobacteria naturally occur in a range of ecological niches that are either directly or indirectly connected to the animal gastrointestinal tract, such as the human oral cavity, the insect gut and sewage. To be able to survive in these particular ecological niches, bifidobacteria must possess specific adaptations to be competitive. Determination of genome sequences has revealed genetic attributes that may explain bifidobacterial ecological fitness, such as metabolic abilities, evasion of the host adaptive immune system and colonization of the host through specific appendages. However, genetic modification is crucial toward fully elucidating the mechanisms by which bifidobacteria exert their adaptive abilities and beneficial properties. In this review we provide an up to date summary of the general features of bifidobacteria, whilst paying particular attention to the metabolic abilities of this species. We also describe methods that have allowed successful genetic manipulation of bifidobacteria.

Highlights

  • The past 20 years has seen a research focus on those members of the gut microbiota that exhibit health-promoting or probiotic effects such as protection of the host against pathogens by competitive exclusion (Bernet et al, 1994; Hooper et al, 1999), modulation of the immune system (O’Hara and Shanahan, 2007), and provision of nutrients through the breakdown of non-digestible dietary carbohydrates (Roberfroid et al, 1995; Leahy et al, 2005)

  • The majority of studies base their findings on murine models, and results suggest that a combination of prebiotics and bifidobacteria may reduce the occurrence of carcinogen-induced cancerous cells in mice (Sekine et al, 1985; Rowland et al, 1998; Rafter et al, 2007; Le Leu et al, 2010)

  • It is well established that bifidobacteria confer positive health benefits to their host via their metabolic activities

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Summary

Bifidobacteria and Their Role as Members of the Human Gut Microbiota

Alimentary Pharmabiotic Centre and School of Microbiology, University College Cork, Cork, Ireland. Members of the genus Bifidobacterium are among the first microbes to colonize the human gastrointestinal tract and are believed to exert positive health benefits on their host. Due to their purported health-promoting properties, bifidobacteria have been incorporated into many functional foods as active ingredients. To be able to survive in these particular ecological niches, bifidobacteria must possess specific adaptations to be competitive. Determination of genome sequences has revealed genetic attributes that may explain bifidobacterial ecological fitness, such as metabolic abilities, evasion of the host adaptive immune system and colonization of the host through specific appendages. Genetic modification is crucial toward fully elucidating the mechanisms by which bifidobacteria exert their adaptive abilities and beneficial properties.

INTRODUCTION
GENERAL FEATURES OF BIFIDOBACTERIAL GENOMES
Bifidobacteria and Colorectal Cancer
Bifidobacteria and Diarrhoea
Bifidobacteria and Necrotizing Entercolitis
Bifidobacteria and Inflammatory Bowel Disease
Bifidobacteria and Colon Regularity
Bifidobacteria and Competitive Exclusion
BIFIDOBACTERIA AND FUNCTIONAL FOODS
BIFIDOBACTERIAL CARBOHYDRATE
Carbohydrate Uptake Strategies by Bifidobacteria
Bifidobacterial Glycosyl Hydrolases
Adenine glycosylase
CARBOHYDRATE METABOLISM
BIOTECHNOLOGY OF BIFIDOBACTERIA
BIFIDOBACTERIAL MUTAGENESIS STRATEGIES
TRANSPOSON MUTAGENESIS FOR GENE DISRUPTION
Homologous Recombination Mediated by a Temperature Sensitive Plasmid
Transposons for Mutagenesis in
CONJUGATION IN BIFIDOBACTERIA
Findings
CONCLUSION
Full Text
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