Abstract
BackgroundResuscitation promoting factors (Rpfs) are the proteins involved in the process of reactivation of the dormant cells of mycobacteria. Recently a new class of nitrophenylthiocyanates (NPTs), capable of inhibiting the biological and enzymatic activities of Rpfs has been discovered. In the current study the inhibitory properties of the compounds containing both nitro and thiocyanate groups alongside with the compounds with the modified number and different spatial location of the substituents are compared.MethodsNew benzoylphenyl thiocyanates alongside with nitrophenylthiocyanates were tested in the enzymatic assay of bacterial peptidoglycan hydrolysis as well as against strains of several actinobacteria (Mycobacterium smegmatis, Mycobacterium tuberculosis) on in-lab developed models of resuscitation of the dormant forms.ResultsIntroduction of the additional nitro and thiocyanate groups to the benzophenone scaffold did not influence the inhibitory activity of the compounds. Removal of the nitro groups analogously did not impair the functional properties of the molecules. Among the tested compounds two molecules without nitro group: 3-benzoylphenyl thiocyanate and 4-benzoylphenyl thiocyanate demonstrated the maximum activity in both enzymatic assay (inhibition of the Rpf-mediated peptidoglycan hydrolysis) and in the resuscitation assay of the dormant M. tuberculosis cells.ConclusionsThe current study demonstrates dispensability of the nitro group in the NPT’s structure for inhibition of the enzymatic and biological activities of the Rpf protein molecules. These findings provide new prospects in anti-TB drug discovery especially in finding of molecular scaffolds effective for the latent infection treatment.
Highlights
Resuscitation promoting factors (Rpfs) are the proteins involved in the process of reactivation of the dormant cells of mycobacteria
For the current study, a panel of 4-benzoyl-2-nitrophenyl thiocyanate derivatives has been designed by the methods of medicinal chemistry and successfully synthesized
The newly created chemicals were varying in a number of thiocyanate and nitro groups, as well as in their mutual spatial position: among them were benzoylphenyl thiocyanates (BPTs): (II)–(III), (V)–(VI) and a nitrophenylthiocyanate (NPT): (IV) (Table 1, Fig. 1)
Summary
Resuscitation promoting factors (Rpfs) are the proteins involved in the process of reactivation of the dormant cells of mycobacteria. In the previous work of Ruggiero with co-authors [11], a combination of X-ray crystallography and a computational approach (REMD with the calculation of free energy of binding) allowed to investigate the mechanism of protein-ligand (I) interaction, having suggested the importance of the thiocyanate group for inhibitory properties of the 4-benzoyl-2-nitrophenyl thiocyanate. These findings suggested that the nitro group in the NPT’s structure was presumable dispensable for their activity [11]
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