Bacterial endophytes diversity of tree legumes from Argentina

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The aim of this work was to isolate and characterize, based on microbiological as well as molecular markers, bacteria within nodules of three native trees species from South America: Poecilanthe parviflora Benth (Lapachillo), Vachellia caven (Molina) Seigler & Ebinger (Espinillo), and Enterolobium contortisiliquum (‎Vell.‎) ‎Morong (Timbó). In line with this, we isolated and characterized 15 bacteria from P. parviflora, 6 from V. caven and 1 from E. contortisiliquum. Among them we identified representatives of Bradyrhizobium sp. from E. contorsiliquum and P. parviflora, as well as of Ensifer sp. (Sinorhizobium) and Mesorhizobium sp. from V. caven. Also, other bacteria were found, like representatives of Bacillus sp., Microbacterium sp. and Curtobacterim sp., as well as Caulobacter sp., Dyella sp., Pseudomonas sp. and Enterobacter sp. Some of these isolates inhibited the growth of two fungal plant pathogens. So, nodules of these native legumes not only are occupied by highly diverse rhizobia but also by other bacteria that might promote plant growth.

Highlights

  • The Leguminosae (Fabaceae) is the third-largest plant family among angiosperms that comprises 20,000 species and 750 genera[1](2)(3)(4)

  • South American native tree legumes V. caven and P. parviflora harbour a great diversity of endophytic bacteria and alpha-rhizobia in their root nodules

  • E. contorsiliquum may establish a nitrogen-fixing symbiosis with Bradyrhizobium lianonginese, and P. parviflora may develop nodules with Bradyrhizobium spp strains that need to be studied further to determine the species

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Summary

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The Leguminosae (Fabaceae) is the third-largest plant family among angiosperms that comprises 20,000 species and 750 genera[1](2)(3)(4). Legumes establish a symbiotic association with Gramnegative soil bacteria known as rhizobia[1](5) that results in the development of nodules in roots and stems, where atmospheric nitrogen is reduced (fixed) to ammonia, that is assimilated by plants into organic compounds. The family of legumes is divided into three subfamilies that include mostly plants adapted to tropical regions, Cesalpinoidea, Papilinoidea and Mimosoidea; within the former one, only 11 genera form nitrogen-fixing nodules[1](6). Rhizobia vary in specificity as well as legumes, while some of them nodulate several hosts, others nodulate only one or two species. Several hosts are nodulated by several rhizobia, including both Alpha and Betaproteobacteria. The rhizobial strain-host genotype interaction is highly specific, to the point that two closely related species of plants are nodulated by different species of rhizobia[7]

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CitationsShowing 3 of 3 papers
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  • 10.1007/s11274-023-03699-w
Promoting the growth of Sulla flexuosa L. by endophytic root nodule bacteria authors and affiliations.
  • Jul 17, 2023
  • World Journal of Microbiology and Biotechnology
  • Samia Hamane + 6 more

Legume plants rely upon multipartite interactions between rhizobia and bacterial endophytes within root nodules to facilitate plant growth. This study aimed to isolate and identify indigenous endophytic bacteria from root nodules of Sulla aculeolata L. in Northeast Morocco. Based on their tri-calcium phosphate (TCP) solubilization capacity, five endophytes were chosen for further evaluation of their plant growth traits. All isolates were hydrogen cyanide (HCN) and siderophore producers, while only BCH24 tested positive for ACC deaminase activity. Indole-3-acetic acid (IAA) synthesis ranged from 1.27 mgL- 1 to 2.89 mgL- 1, while soluble phosphate concentrations was between 7.99mg L- 1 and 110.58mg L- 1. Additionally, all the endophytes were able to produce more than two lytic enzymes. Based on the analysis of 16S rRNA gene sequences five isolates were identified as Enterobacter sp (BCH13, BCH2), Pseudomonas sp (BCH16, BCH24), and Serratia sp (BCH10). The strains inhibited the growth of three phytopathogenic fungi, with BCH13 exhibiting the highest rate against Aspergillus ochraceus (45%), followed by BCH24 against Fusarium oxysporum (40%) and Botrytis cinerea (35%), respectively. In vivo inoculation of halotolerant strains Enterobacter hormaechei (BCH13) and Pseudomonas moraviensis (BCH16) under gnotobiotic conditions revealed that co-inoculation with Rhizobium sullae KS6 improved plant development compared to single inoculation, making it a promising eco-friendly bio-inoculant for legume Sulla flexuosa L. production.

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  • Preprint Article
  • 10.21203/rs.3.rs-2931337/v1
Application of endophytic bacteria isolated from root nodules of Sulla aculeolata L. and Rhizobium sullae KS6 consortium in the growth of legume Sulla flexuosa L
  • May 17, 2023
  • Hamane Samia + 6 more

Abstract Legume plants rely upon multipartite interactions between rhizobia and bacterial endophytes within root nodules to facilitate plant growth. This study sought to isolate and identify indigenous endophytic bacteria from root nodules of Sulla aculeolata L. in Northeast Morocco. Based on their tri-calcium phosphate (TCP) solubilization capacity, five endophytes were chosen for further evaluation of their plant growth activities. All isolates were hydrogen cyanide (HCN) and siderophore producers, while only BCH24 tested positive for ACC deaminase activity. Indole-3-acetic acid (IAA) synthesis ranged from 1.27 mg L− 1 to 2.89 mg L− 1, with soluble phosphate concentrations between 7.99 mg L− 1 and 110.58 mg L− 1. Additionally, all the endophytes were able to produce more than two lytic enzymes. The 16S rRNA gene sequencing identified the five isolates as Enterobacter sp (BCH13, BCH2), Pseudomonas sp (BCH16, BCH24), and Serratia sp (BCH10). The strains inhibited the growth of three phytopathogenic fungi, with BCH13 exhibiting the highest rate against Aspergillus ochraceus (45%), followed by BCH24 against Fusarium oxysporum (40%) and Botrytis cinerea (35%), respectively. In vivo inoculation of halotolerant strains Enterobacter hormaechei (BCH13) and Pseudomonas moraviensis (BCH16) under chamber conditions revealed that co-inoculation with Rhizobium sullae KS6 improved plant development compared to single inoculation, making it a promising eco-friendly bio-inoculant for legume Sulla flexuosa L. production.

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Impact of antagonistic endophytic bacteria on productivity of some economically important legumes.
  • Jan 6, 2024
  • Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]
  • Ayat M Badawy

Understanding the interactions within and between endophytes and their hosts is still obscure. Investigating endophytic bacterial plant growth-promoting (PGP) traits and co-inoculation effects on legumes' performance is a candidate. Endophytic bacteria were isolated from Vicia sativa root nodules. Such endophytes were screened for their PGP traits, hydrolytic enzymes, and antifungal activities. Sterilized Vicia faba and Pisum sativum seedlings were co-inoculated separately with seven different endophytic bacterial combinations before being planted under sterilized conditions. Later on, several growth-related traits were measured. Eleven endophytes (six rhizobia, two non-rhizobia, and three actinomycetes) could be isolated, and all of them were indole-acetic-acid (IAA) producers, while seven isolates could solubilize phosphorus, whereas three, five, five, and four isolates could produce protease, cellulase, amylase, and chitinase, respectively. Besides, some of these isolates possessed powerful antifungal abilities against six soil-borne pathogenic fungi. Co-inoculation of tested plants with endophytic bacterial mixes (Rhizobiamix+Actinomix+non-Rhizobiamix), (Rhizobiamix+Actinomix), or (Rhizobiamix+non-Rhizobiamix) significantly improved the studied growth parameters (shoot, root fresh and dry weights, length and yield traits) compared to controls, whereas co-inoculated plants with (Rhizobiaalone), (non-Rhizobiamix), or (Actinomix) significantly recorded lower growth parameters. Five efficient endophytes were identified: Rhizobium leguminosarum bv. Viciae, Rhizobium pusense, Brevibacterium frigoritolerans, Streptomyces variabilis, and Streptomyces tendae. Such results suggested that these isolates could be utilized as biocontrols and biofertilizers to improve legumes productivity. Also, co-inoculation with different endophytic mixes is better than single inoculation, a strategy that should be commercially exploited.

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  • Journal of Vegetation Science
  • Agustina Malizia + 3 more

AimsLigustrum lucidum, native to China, is one of the dominant exotic and invasive tree species in secondary forests in Argentina. (1) We assessed its invasion during 20 yr in post‐agricultural secondary forests dominated by native tree species, and (2) evaluated tree demographic rates of native individuals under and away from L. lucidum trees that invaded these forests.LocationsFour 1‐ha permanent plots of secondary forests, subtropical Andes of Tucumán, Argentina.MethodsWe quantified the invasion of L. lucidum individuals (≥10‐cm diameter) from 1991 to 2011 within four 1‐ha plots of secondary forests and analysed annual growth and mortality rates of native tree individuals (≥10‐cm diameter) under and away from L. lucidum trees. For this, we compared tree demographic rates of all native individuals together (community level) under and away from individuals of L. lucidum, referred to as exotic and native neighbourhoods, respectively. Then, we described the relative growth rate of native tree species in exotic/native neighbourhoods (species level) and related them to their demographic life histories and morpho‐physiological traits.ResultsBoth density and basal area of L. lucidum increased from 0.1% to 4% between 1991 and 2011. Native tree individuals grew 65% less in exotic neighborhoods compared to native neighborhoods. Relative growth rate showed negative values under L. lucidum individuals for the abundant species Ocotea porphyria, Parapitadenia excelsa, Juglans austalis and Allophylus edulis, indicating competition; while less abundant species Terminalia triflora, Cupania vernalis and Blepharocalix saliscifolius showed positive growth values under L. lucidum, suggesting a facilitation process. Thus, L. lucidum competes efficiently with some native tree species, particularly with those abundant species that dominate the canopy.ConclusionsLigustrum lucidum is invading post‐agricultural secondary forests dominated by native tree species. While invading, L. lucidum competes with native abundant tree species that dominate the main structure of the forest canopy. As this invasive trend will likely increase in the near future, L. lucidum may alter forest structure, composition and dynamics, as well ecosystem functioning.

  • Research Article
  • Cite Count Icon 58
  • 10.1016/j.ufug.2009.06.004
URban Biotopes of Aotearoa New Zealand (URBANZ) II: Floristics, biodiversity and conservation values of urban residential and public woodlands, Christchurch
  • Jan 1, 2009
  • Urban Forestry & Urban Greening
  • G.H Stewart + 7 more

URban Biotopes of Aotearoa New Zealand (URBANZ) II: Floristics, biodiversity and conservation values of urban residential and public woodlands, Christchurch

  • Research Article
  • Cite Count Icon 22
  • 10.3390/plants9111494
Soybean Nodule-Associated Non-Rhizobial Bacteria Inhibit Plant Pathogens and Induce Growth Promotion in Tomato.
  • Nov 5, 2020
  • Plants
  • Serkan Tokgöz + 5 more

The root nodules are a unique environment formed on legume roots through a highly specific symbiotic relationship between leguminous plants and nodule-inducing bacteria. Previously, Rhizobia were presumed to be the only group of bacteria residing within nodules. However, recent studies discovered diverse groups of bacteria within the legume nodules. In this report soybean nodule-associated bacteria were studied in an effort to identify beneficial bacteria for plant disease control and growth promotion. Analysis of surface-sterilized single nodules showed bacterial diversity of the nodule microbiome. Five hundred non-rhizobial colonies from 10 nodules, 50 colonies per nodule, were tested individually against the tomato wilt causing bacterial pathogen Clavibacter michiganensis subsp. michiganensis (Cmm) for inhibition of pathogen growth. From the initial screening, 54 isolates were selected based on significant growth inhibition of Cmm. These isolates were further tested in vitro on another bacterial pathogen Pseudomonas syringae pv. tomato (Pst) and two fungal pathogens Rhizoctonia solani and Sclerotinia sclerotiorum. Bacterial metabolites were extracted from 15 selected isolates with ethanol and tested against pathogen Cmm and Pst. These isolates were identified by using MALDI-TOF mass spectrometry and 16S rRNA gene sequencing. Pseudomonas spp. were the dominant soybean nodule-associated non-rhizobial bacterial group. Several isolates imparted significant protection against pathogens and/or plant growth promotion on tomato seedlings. The most promising nodule-associated bacterial isolate that suppressed both Cmm and Pst in vitro and Pst in tomato seedlings was identified as a Proteus species. Isolation and identification of beneficial nodule-associated bacteria established the foundation for further exploration of potential nodule-associated bacteria for plant protection and growth promotion.

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  • Research Article
  • Cite Count Icon 4
  • 10.3390/f13020277
Biochar Rescues Native Trees in the Biodiversity Hotspot of Mauritius
  • Feb 9, 2022
  • Forests
  • Leeladarshini Sujeeun + 1 more

Many tropical invasive species have allelopathic effects that contribute to their success in native plant communities. Pyrolyzed biomass (“biochar”) can sorb toxic compounds, including allelochemicals produced by invasive plants, potentially reducing their inhibitory effects on native species. Strawberry guava (Psidium cattleianum) is among the most important allelopathic invasive species on tropical islands and recognized as the most serious threat among invasive species in the global biodiversity hotspot of Mauritius. We investigated the effects of additions of locally produced biochar on native tree species in a field experiment conducted in areas invaded by strawberry guava within Mauritius’ largest national park. Growth and survivorship of native tree species were monitored over 2.5 years in plots subjected to four treatments: non-weeded, weeded, weeded + 25 t/ha biochar, and weeded + 50 t/ha biochar. Native tree growth and survivorship were strongly suppressed by strawberry guava. Biochar treatments dramatically increased native tree performance, with more than a doubling in growth, and substantially increased native tree survivorship and species diversity, while suppressing strawberry guava regeneration, consistent with growth-promoting properties and sorption of allelochemicals. We conclude that biochars, including “sustainable biochars” produced from locally accessible biomass using low-tech pyrolysis systems, have considerable potential to counteract effects of allelopathic invaders and increase the capacity for native species regeneration in tropical island ecosystems.

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