Bacterial and fungal communities exhibit contrasting patterns in response to marsh erosion: A fine-scale observation

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Coastal salt marshes, especially their seaward boundaries, are experiencing severe erosion and area loss worldwide because of human disturbances and natural changes. However, how marsh erosion affects soil microbial communities and their potential functions remains poorly understood in subtropical coastal ecosystems. Herein, simultaneous measurements of the abundance, diversity, and composition of bacterial and fungal communities were conducted along a marsh erosion gradient, based on Illumina sequencing of 16S rRNA and ITS genes. Our results indicate that marsh erosion is often accompanied by a loss of plant biomass and a decrease in soil total carbon, total nitrogen, and organic matter concentrations, but an increase in soil water content. We found that the abundance of bacteria and fungi tended to decrease with erosion, especially for bacterial communities. Marsh erosion had opposite effects on the alpha-diversity of bacterial and fungal communities, with bacterial diversity decreasing but fungal diversity increasing with marsh erosion. The beta-diversity and composition of bacterial and fungal communities were altered by marsh erosion, and in particular bacterial communities were clustered into three groups: uneroded, eroding, and eroded. Network analysis demonstrated that the inter-relationships of the bacterial community did not significantly change with the erosion gradient, but the complexity of the fungal networks increased. The diversity and composition of the bacterial and fungal communities can be jointly explained by plant biomass, soil nutrient dynamics, and bulk density. We conclude that marsh erosion-induced changes in soil properties and plant loss altered the diversity and composition of bacterial and fungal communities, which decrease bacterial abundance and diversity but increase fungal diversity and network complexity, suggesting that these microbial taxa contribute differently to soil function and nutrient cycling as marsh erosion continues.