Automated Chinese medicinal plants classification based on machine learning using leaf morpho-colorimetry, fractal dimension and visible/near infrared spectroscopy

Abstract

The identification of Chinese medicinal plants was conducted to rely on ampelographic manual assessment by experts. More recently, machine learning algorithms for pattern recognition have been successfully applied to leaf recognition in other plant species. These new tools make the classification of Chinese medicinal plants easier, more efficient and cost effective. This study showed comparative results between machine learning models obtained from two methods: i) a morpho-colorimetric method and ii) a visible (VIS)/Near Infrared (NIR) spectral analysis from sampled leaves of 20 different Chinese medicinal plants. Specifically, the automated image analysis and VIS/NIR spectral based parameters obtained from leaves were used separately as inputs to construct customized artificial neural network (ANN) models. Results showed that the ANN model developed using the morpho-colorimetric parameters as inputs (Model A) had an accuracy of 98.3% in the classification of leaves for the 20 medicinal plants studied. In the case of the model based on spectral data from leaves (Model B), the ANN model obtained using the averaged VIS/NIR spectra per leaf as inputs showed 92.5% accuracy for the classification of all medicinal plants used. Model A has the advantage of being cost effective, requiring only a normal document scanner as measuring instrument. This method can be adapted for non-destructive assessment of leaves in-situ by using portable wireless scanners. Model B combines the fast, non-destructive advantages of VIS/NIR spectroscopy, which can be used for rapid and non-invasive identification of Chinese medicinal plants and other applications by analyzing specific light spectra overtones from leaves to assess concentration of pigments such as chlorophyll, anthocyanins and others that are related active compounds from the medicinal plants. Keywords: ampelography, computer vision, artificial neural networks, pattern recognition, Chinese medicinal plants DOI: 10.25165/j.ijabe.20191202.4637 Citation: Xue J R, Fuentes S, Poblete-Echeverria C, Viejo C G, Tongson E, Du H J, et al. Automated Chinese medicinal plants classification based on machine learning using leaf morpho-colorimetry, fractal dimension and visible/near infrared spectroscopy. Int J Agric & Biol Eng, 2019; 12(2): 123–131.