Abstract

Heterochromatin maintains genomic stability by inhibiting aberrant recombination. DNA lesions, however, still occur at heterochromatic loci. Therefore, a cell must have ways to circumvent heterochromatin structure during repair of DNA damage. Prior work by our lab identified a role for the chromatin remodeling enzyme SWI/SNF in heterochromatic DNA repair. Here, we present biochemical studies that suggest two distinct mechanisms by which SWI/SNF remodels heterochromatin in an ATP‐dependent manner. The first remodeling mechanism uses a unique physical interaction, between the BAH domain of Sir3p and the ATPase domain of the SWI/SNF catalytic subunit Swi2p, to evict Sir3p from nucleosomal arrays. The second remodeling mechanism occurs between SWI/SNF complex and Sir2/3/4 complex; this reaction results in the eviction of both the histone octamer and bound Sir proteins. These findings establish SWI/SNF complex as a unique regulator of heterochromatin structure.

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