Abstract

The role of preexisting minority drug-resistance mutations in treatment failure has not been fully understood in chronic hepatitis B patients. To understand mechanisms of drug resistance, we analyzed drug-resistance mutations in 46 treatment-failure patients and in 29 treatment-naïve patients and determined linkage patterns of the drug-resistance mutations in individual viral genomes using a highly sensitive parallel allele-specific sequencing (PASS) method. Lamivudine resistance (LAMr) mutations were predominant in treatment-failure patients, irrespective of the inclusion of LAM in the regimen. The primary LAMr mutations M204V and M204I were detected in 100% and 30% of the treatment-failure patients, respectively. Two secondary LAMr mutations (L180M and V173L) were also found in most treatment-failure patients (87% and 78%, respectively). The linkages containing these three mutations dominated the resistant viruses. Importantly, minority LAMr mutations present in <2% of the viral population were detected in 83% of the treatment-naïve patients. Moreover, the low-frequency same linked LAMr mutations (<0.15%) were detected in 24% of the treatment-naïve patients. Our results demonstrate that the selection of preexisting minority linked LAMr mutations may be an important mechanism for the rapid development of LAM resistance, caution the continuous use of LAM to treat drug-experienced and -naïve hepatitis B patients, and underline the importance of the detection of minority single and linked drug-resistance mutations before initiating antiviral therapy.

Highlights

  • Hepatitis B virus (HBV) infection affects,350 million people worldwide [1], and 15%–40% of chronic hepatitis B (CHB) patients can develop cirrhosis, hepatic failure, and hepatocellular carcinoma in their lifetime [2]

  • Six predominant drug-resistance mutations (M204V, L180M, V173L, A181T, M204I and L80I) were detected in 30%– 100% of the patients and they were all associated with LAM resistance, whereas the other seven mutations (A194T, N236T, T184G, L80V, M250V, A181V and S202I) were detected in,10% of the patients (Fig. 1A)

  • The primary LAM resistance (LAMr) mutation M204V was detected in all 46 treatment-failure patients, while the primary LAMr mutation M204I was found in 30% of the patients

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Summary

Introduction

Hepatitis B virus (HBV) infection affects ,350 million people worldwide [1], and 15%–40% of chronic hepatitis B (CHB) patients can develop cirrhosis, hepatic failure, and hepatocellular carcinoma in their lifetime [2]. Patients treated with LAM quickly develop resistance due to the emergence of primary M204V and M204I mutations, which can significantly affect viral fitness [8,9,10,11]. Both primary mutations are often accompanied by secondary/compensatory mutations (L180M/I, V173L, and L80V/I), which can either increase the level of the resistance or restore the fitness loss [12,13,14,15,16]. We analyzed the HBV drug-resistance mutations in 46 treatment-failure patients and 29 treatment-naıve patients using the PASS assay to study drug-resistance mechanisms in CHB patients

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