Abstract

AT-rich interactive domain 1A (ARID1A) and AT-rich interactive domain 1B (ARID1B) are subunits of the SWI/SNF chromatin complex. ARID1A is a tumor suppressor gene that is frequently mutated (46%) in ovarian clear cell carcinomas (OCCC). Loss of ARID1B in an ARID1A-deficient background eliminates the intact SWI/SNF complex, indicating that ARID1B is essential for the formation or stabilization of an intact SWI/SNF complex and, thus, the survival of ARID1A-mutant cancer cell lines. In this study, we investigated the clinicopathologic and prognostic relevance of ARID1B in OCCC by immunohistochemical analysis of 53 OCCC patient samples and loss-of-function experiments in OCCC cell lines. We also examined whether ARID1B could be a therapeutic target or prognostic biomarker in OCCC. siRNA-mediated knockdown of ARID1B in an ARID1A-mutant cell line significantly decreased cell growth, whereas concurrent depletion of both ARID1A and ARID1B was required to decrease wild type cell growth. In the immunohistochemical analyses, low ARID1B level was frequent in samples lacking ARID1A and was associated with shorter progression-free survival. This is the first report demonstrating that a low ARID1B level could be a marker of poor prognosis in OCCC. Moreover, the correlation between the loss of ARID1A immunoreactivity and reduced ARID1B levels indicates that ARID1B could be an attractive target for anti-cancer therapy.

Highlights

  • Ovarian cancer is the most lethal gynecological malignancy in the world [1] and its incidence has increased in the last decade

  • We examined the relationship between AT-rich interactive domain 1A (ARID1A) and AT-rich interactive domain 1B (ARID1B) protein expression in 53 ovarian clear cell carcinoma (OCCC) patient specimens by immunohistochemistry

  • Our data demonstrate that ARID1B plays an important role in the growth of ARID1A-mutant OCCC

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Summary

Introduction

Ovarian cancer is the most lethal gynecological malignancy in the world [1] and its incidence has increased in the last decade. AT-rich interactive domain 1A (ARID1A) is a novel tumor suppressor gene that is frequently mutated in OCCC; ARID1A mutations were identified in 55/119 (46%) OCCC patients in one study with a strong correlation between OCCC and loss of BAF250a protein and the presence of ARID1A mutations [5]. ARID1A is a Switch/Sucrose non-fermentable (SWI/SNF) chromatin remodeling complex subunit that regulates many cellular processes such as development, proliferation, differentiation, DNA repair, and tumor suppression [6]. Mutation or loss of ARID1A can affect the expression or stability of other SWI/SNF complex subunits. It was recently reported that inactivating mutations in ARID1A create

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