Abstract

Chemistry is considered as one of the more promising applications to science of near-term quantum computing. Recent work in transitioning classical algorithms to a quantum computer has led to great strides in improving quantum algorithms and illustrating their quantum advantage. Because of the limitations of near-term quantum computers, the most effective strategies split the work over classical and quantum computers. There is a proven set of methods in computational chemistry and materials physics that has used this same idea of splitting a complex physical system into parts that are treated at different levels of theory to obtain solutions for the complete physical system for which a brute force solution with a single method is not feasible. These methods are variously known as embedding, multi-scale, and fragment techniques and methods. We review these methods and then propose the embedding approach as a method for describing complex biochemical systems, with the parts not only treated with different levels of theory, but computed with hybrid classical and quantum algorithms. Such strategies are critical if one wants to expand the focus to biochemical molecules that contain active regions that cannot be properly explained with traditional algorithms on classical computers. While we do not solve this problem here, we provide an overview of where the field is going to enable such problems to be tackled in the future.

Highlights

  • Biochemical systems are essential for carrying out biological functions, and their actions span extreme time and length scales

  • We present three important and representative biochemical systems whose properties make them attractive targets for quantum computing

  • We review the methodology of embedding as it has been used for several decades to describe complex chemical systems, including large bio-molecules in liquids and solidstate systems, by dividing them into parts that are treated with different levels of physical theory

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Summary

INTRODUCTION

Biochemical systems are essential for carrying out biological functions, and their actions span extreme time and length scales. We formulate a general approach of embedding to describe part of the system on classical computers and the most demanding part on a quantum computer resulting in a complete solution of the complex system with useful accuracy. This will allow quantum computers to be used for such demanding problems without the requirement that a quantum computer be available to hold and process the entire system of interest. We will make it clear which meaning is used when it is used

MOTIVATING EXAMPLES
A Transition-Metal-Ion-Containing Enzyme
Non-Metal-Ion-Containing Enzyme
Molecular Recognition
CLASSICAL COMPUTER EMBEDDING STRATEGIES
Hybrid Quantum-Classical Molecular Dynamics
From DFT to Strongly Correlated Systems
Quantum Algorithms and Methods
Phase Estimation
QUANTUM COMPUTER EMBEDDING STRATEGIES
Quantum Computing on Fragments
Sparse Green’s Function Embedding Schemes
CHALLENGES
CONCLUSION
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