Abstract

Plant antimicrobial peptides (AMPs) have evolved differently from AMPs from other life forms. They are generally rich in cysteine residues which form multiple disulfides. In turn, the disulfides cross-braced plant AMPs as cystine-rich peptides to confer them with extraordinary high chemical, thermal and proteolytic stability. The cystine-rich or commonly known as cysteine-rich peptides (CRPs) of plant AMPs are classified into families based on their sequence similarity, cysteine motifs that determine their distinctive disulfide bond patterns and tertiary structure fold. Cystine-rich plant AMP families include thionins, defensins, hevein-like peptides, knottin-type peptides (linear and cyclic), lipid transfer proteins, α-hairpinin and snakins family. In addition, there are AMPs which are rich in other amino acids. The ability of plant AMPs to organize into specific families with conserved structural folds that enable sequence variation of non-Cys residues encased in the same scaffold within a particular family to play multiple functions. Furthermore, the ability of plant AMPs to tolerate hypervariable sequences using a conserved scaffold provides diversity to recognize different targets by varying the sequence of the non-cysteine residues. These properties bode well for developing plant AMPs as potential therapeutics and for protection of crops through transgenic methods. This review provides an overview of the major families of plant AMPs, including their structures, functions, and putative mechanisms.

Highlights

  • Higher plants have a broad range of defense mechanisms to counter physical, chemical and biological stress such as drought, cold, heavy metal, pollutants and pathogen attacks from fungi, bacteria and viruses

  • This review aims to provide a general overview of the major families of plant antimicrobial peptides (AMPs), including their structures, functions, and putative mechanisms of defense

  • Triticum kiharae have precursor similar to other families cysteine-rich peptides (CRPs)-AMPs, with a 45aa C-terminal region [144], while Ee-CBP 10C-hevein from Euonymus europaeus is produced as a chimeric precursor consisting of the mature peptide domain linked to a long C-terminal chitinase-like domain [145]

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Summary

Introduction

Higher plants have a broad range of defense mechanisms to counter physical, chemical and biological stress such as drought, cold, heavy metal, pollutants and pathogen attacks from fungi, bacteria and viruses. Plant AMPs share several common characteristics with those from microbes, insects and animals They include features such as their molecular forms, positive charge and amphipathic nature, all of which are primarily related to their defensive role(s) as membrane-active antifungals, antibacterials, and antivirals. These features, in addition to being Cys-rich, are well represented by two plant AMP families, thionins and plant defensins. Sequence analysis and genomic data mining using these Cys motifs have revealed that Cys-rich peptides (CRPs) with AMP characteristics are under-predicted [11] In model plants, such as rice and Arabidopsis, CRPs may account for about 3% of the expressed proteins. Information on AMPs from diverse organisms can be accessed through several databases, such as APD, APD2 [26,27], YADAMP [28], DAMPD [29], and PhytAMP (specific for plant AMPs) [10]

Classification and Characteristics
Structure
Structure-Function Relationship
Mechanism of Action
Plant Defensins
Structures
Hevein-Like Peptides
Structure-Function Study
Knottin-Type Peptides
Knottin Scaffold in Pharmaceutical Engineering
Lipid Transfer Proteins
Snakins
Other Plant CRP-AMPs
Non-CRP Plant AMPs
2.10. Mechanism of AMP Action
Findings
Conclusions and Perspective
Full Text
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