Abstract

Heme a is an essential cofactor for function of cytochrome c oxidase in the mitochondrial electron transport chain. Several evolutionarily conserved enzymes have been implicated in the biosynthesis of heme a, including the heme a synthase Cox15. However, the structure of Cox15 is unknown, its enzymatic mechanism and the role of active site residues remain debated, and recent discoveries suggest additional chaperone-like roles for this enzyme. Here, we investigated Cox15 in the model eukaryote Saccharomyces cerevisiae via several approaches to examine its oligomeric states and determine the effects of active site and human pathogenic mutations. Our results indicate that Cox15 exhibits homotypic interactions, forming highly stable complexes dependent upon hydrophobic interactions. This multimerization is evolutionarily conserved and independent of heme levels and heme a synthase catalytic activity. Four conserved histidine residues are demonstrated to be critical for eukaryotic heme a synthase activity and cannot be substituted with other heme-ligating amino acids. The 20-residue linker region connecting the two conserved domains of Cox15 is also important; removal of this linker impairs both Cox15 multimerization and enzymatic activity. Mutations of COX15 causing single amino acid conversions associated with fatal infantile hypertrophic cardiomyopathy and the neurological disorder Leigh syndrome result in impaired stability (S344P) or catalytic function (R217W), and the latter mutation affects oligomeric properties of the enzyme. Structural modeling of Cox15 suggests these two mutations affect protein folding and heme binding, respectively. We conclude that Cox15 multimerization is important for heme a biosynthesis and/or transfer to maturing cytochrome c oxidase.

Highlights

  • Heme is a vital cofactor in living cells, and the derivative heme a is critical for mitochondrial respiration

  • Mutations resulting in alterations of conserved residues of COX10, COX15, and SURF1 have been linked to a variety of devastating diseases, including fatal infantile hypertrophic cardiomyopathy and the neurological disorder Leigh syndrome (LS) (14 –25)

  • Yeast Heme a Synthase Complexes Contain Multiple Copies of Cox15—A previous report has indicated that Cox15 associates with Shy1 and with early Cytochrome c oxidase (CcO) assembly intermediates but is a substoichiometric component of those intermediates [10]

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Summary

The abbreviations used are

CcO, cytochrome c oxidase; BN, blue native; LS, Leigh syndrome. Oligomerization of Cox mentable media, enabling studies in the absence of functional Cox or Cox15 [2, 3, 9, 10]. Expression of Cox, but not Cox, is activated by the heme b-dependent transcription factor Hap1 [26]. Both proteins are large, polytopic proteins residing in the mitochondrial inner membrane with seven to nine predicted transmembrane segments [1, 27]. Many important questions about the eukaryotic heme a synthase remain unanswered, including the roles of oligomeric complexes formed by Cox, whether the oligomerization process is regulated, and the molecular architecture of the Cox enzyme and its active site. We analyzed Cox high mass complexes, interrogated several aspects of Cox structure, tested the effects of the human COX15 mutations associated with mitochondrial disease on the stability and function of the Saccharomyces cerevisiae enzyme, and modeled the structure of Cox to analyze the roles of these structural features. Cox oligomers are important for heme a biosynthesis and/or subsequent delivery to maturing CcO and may serve as a platform for CcO assembly

Experimental Procedures
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