Abstract

BackgroundThe Special AT-rich Sequence Binding Protein 1 (SATB1) regulates the expression of many genes by acting as a global chromatin organizer. While in many tumor entities SATB1 overexpression has been observed and connected to pro-tumorigenic processes, somewhat contradictory evidence exists in brain tumors with regard to SATB1 overexpression in glioblastoma and its association with poorer prognosis and tumor progression. On the functional side, initial data indicate that SATB1 may be involved in several tumor cell-relevant processes.MethodsFor the detailed analysis of the functional relevance and possible therapeutic potential of SATB1 inhibition, we employ transient siRNA-mediated knockdown and comprehensively analyze the cellular and molecular role of SATB1 in glioblastoma.ResultsIn various cell lines with different SATB1 expression levels, a SATB1 gene dose-dependent inhibition of anchorage-dependent and –independent proliferation is observed. This is due to cell cycle-inhibitory and pro-apoptotic effects of SATB1 knockdown. Molecular analyses reveal SATB1 knockdown effects on multiple important (proto-) oncogenes, including Myc, Bcl-2, Pim-1, EGFR, β-catenin and Survivin. Molecules involved in cell cycle, EMT and cell adhesion are affected as well. The putative therapeutic relevance of SATB1 inhibition is further supported in an in vivo tumor xenograft mouse model, where the treatment with polymeric nanoparticles containing SATB1-specific siRNAs exerts antitumor effects.ConclusionOur results demonstrate that SATB1 may represent a promising target molecule in glioblastoma therapy whose inhibition or knockdown affects multiple crucial pathways.

Highlights

  • The Special AT-rich Sequence Binding Protein 1 (SATB1) regulates the expression of many genes by acting as a global chromatin organizer

  • The same was true for primary tumor cells derived from these tumors, with values often, but not in all cases being comparable between a primary tumor and its corresponding primary cell line (Additional file 4: Figure S1, center)

  • We conclude that Special AT-rich sequence binding protein 1 (SATB1) expression levels may only poorly predict its functional relevance, requiring more detailed analyses in a panel of cell lines with different SATB1 expression levels

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Summary

Introduction

The Special AT-rich Sequence Binding Protein 1 (SATB1) regulates the expression of many genes by acting as a global chromatin organizer. While in many tumor entities SATB1 overexpression has been observed and connected to pro-tumorigenic processes, somewhat contradictory evidence exists in brain tumors with regard to SATB1 overexpression in glioblastoma and its association with poorer prognosis and tumor progression. Malignant glioblastoma is the most common primary adult brain tumor in Western nations [1]. Despite aggressive treatment regimens including surgery, chemoand radiotherapy, the prognosis for patients with the highest grade tumor, glioblastoma multiforme (GBM), has remained very poor. The Special AT-rich Sequence Binding Protein 1 (SATB1) has been shown to regulate the expression of a large number of genes by acting as a global chromatin organizer [2]. In the nuclei of thymocytes, SATB1 has a cage-like network distribution

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