Abstract

Multimodal registration is a challenging task due to the significant variations exhibited from images of different modalities. CT and MRI are two of the most commonly used medical images in clinical diagnosis, since MRI with multicontrast images, together with CT, can provide complementary auxiliary information. The deformable image registration between MRI and CT is essential to analyze the relationships among different modality images. Here, we proposed an indirect multimodal image registration method, i.e., sCT-guided multimodal image registration and problematic image completion method. In addition, we also designed a deep learning-based generative network, Conditional Auto-Encoder Generative Adversarial Network, called CAE-GAN, combining the idea of VAE and GAN under a conditional process to tackle the problem of synthetic CT (sCT) synthesis. Our main contributions in this work can be summarized into three aspects: (1) We designed a new generative network called CAE-GAN, which incorporates the advantages of two popular image synthesis methods, i.e., VAE and GAN, and produced high-quality synthetic images with limited training data. (2) We utilized the sCT generated from multicontrast MRI as an intermediary to transform multimodal MRI-CT registration into monomodal sCT-CT registration, which greatly reduces the registration difficulty. (3) Using normal CT as guidance and reference, we repaired the abnormal MRI while registering the MRI to the normal CT.

Highlights

  • Deformable image registration (DIR) is to find the spatial relationship between two or more images and is abundantly used in medical image analysis, such as image fusion, lesion detection, disease diagnosis, surgical planning, and navigation

  • Inspired by conditional Generative Adversarial Network (GAN) (CGAN) [15] and Variational Auto-Encoder (VAE)/GAN [16], we proposed a new deep generative network that combines the idea of VAE and GAN under a conditional process to tackle the problem of synthetic Computer Tomography (CT) (sCT) synthesis

  • The values of Measured_CT (a) sCT generated by Conditional Auto-Encoder Generative Adversarial Network (CAE-GAN) (b) sCT generated by FCN-based method (c) sCT generated by FCM-based method (d)

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Summary

Introduction

Deformable image registration (DIR) is to find the spatial relationship between two or more images and is abundantly used in medical image analysis, such as image fusion, lesion detection, disease diagnosis, surgical planning, and navigation. It is necessary to analyze the relationships among images that were acquired from different viewpoints, at different times, or using different sensors/modalities [1]. Computer Tomography (CT) and Magnetic Resonance Imaging (MRI) are two of the most commonly used medical images in the clinical diagnosis due to the complementary information and multicontrast images they provided. MRI has clear anatomical structures and multiple imaging modalities that enable the detection and segmentation of diseased organs and tissues. The DIR of MRI and CT is essential and a challenging task, due to the inherent structural differences among different modalities and the missing dense ground truth

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