An Efficient and Accurate 3D Multiple-Contextual Semantic Segmentation Network for Medical Volumetric Images.

Abstract

Convolutional neural networks have become popular in medical image segmentation, and one of their most notable achievements is their ability to learn discriminative features using large labeled datasets. Two-dimensional (2D) networks are accustomed to extracting multiscale features with deep convolutional neural network extractors, i.e., ResNet-101. However, 2D networks are inefficient in extracting spatial features from volumetric images. Although most of the 2D segmentation networks can be extended to three-dimensional (3D) networks, extended 3D methods are resource and time intensive. In this paper, we propose an efficient and accurate network for fully automatic 3D segmentation. We designed a 3D multiple-contextual extractor (MCE) to simulate multiscale feature extraction and feature fusion to capture rich global contextual dependencies from different feature levels. We also designed a light 3D ResU-Net for efficient volumetric image segmentation. The proposed multiple-contextual extractor and light 3D ResU-Net constituted a complete segmentation network. By feeding the multiple-contextual features to the light 3D ResU-Net, we realized 3D medical image segmentation with high efficiency and accuracy. To validate the 3D segmentation performance of our proposed method, we evaluated the proposed network in the context of semantic segmentation on a private spleen dataset and public liver dataset. The spleen dataset contains 50 patients' CT scans, and the liver dataset contains 131 patients' CT scans.