Abstract

Calmodulin (CaM), a ubiquitous and highly conserved Ca2+-sensor protein involved in the regulation of over 300 molecular targets, has been recently associated with severe forms of lethal arrhythmia. Here, we investigated how arrhythmia-associated mutations in CaM localized at the C-terminal lobe alter the molecular recognition with Ryanodine receptor 2 (RyR2), specifically expressed in cardiomyocytes. We performed an extensive structural, thermodynamic, and kinetic characterization of the variants D95V/H in the EF3 Ca2+-binding motif and of the D129V and D131H/E variants in the EF4 motif, and probed their interaction with RyR2. Our results show that the specific structural changes observed for individual CaM variants do not extend to the complex with the RyR2 target. Indeed, some common alterations emerge at the protein–protein interaction level, suggesting the existence of general features shared by the arrhythmia-associated variants. All mutants showed a faster rate of dissociation from the target peptide than wild-type CaM. Integration of spectroscopic data with exhaustive molecular dynamics simulations suggests that, in the presence of Ca2+, functional recognition involves allosteric interactions initiated by the N-terminal lobe of CaM, which shows a lower affinity for Ca2+ compared to the C-terminal lobe in the isolated protein.

Highlights

  • Calmodulin (CaM) is a small (17 kDa) ubiquitously expressed ­Ca2+-sensor protein encoded by three genes (CALM1-3) located in different chromosomes of the human genome, all expressing the same amino acid sequence

  • We characterized the structural features of the D95V/H substitutions in EF3 and of the D129V and D131H/E substitutions in EF4 (Fig. 2a) at increasing levels of resolution, we probed whether dynamic and/or allosteric alterations occur in the interaction with the Ryanodine receptor 2 (RyR2) peptide

  • A complex tripartite equilibrium between C­ a2+, CaM and RyR2 target is required in cardiomyocytes to achieve a physiological regulation of the C­ a2+-induced ­Ca2+ release (CICR) process

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Summary

Introduction

Calmodulin (CaM) is a small (17 kDa) ubiquitously expressed ­Ca2+-sensor protein encoded by three genes (CALM1-3) located in different chromosomes of the human genome, all expressing the same amino acid sequence. The extremely high structural plasticity of CaM [3] and the free-energy coupling between the processes of C­ a2+and target-binding induce significant changes in the cooperativity of C­ a2+-binding in the CaM-target complex [4,5,6], which makes this system extremely sensitive in sensing even subtle changes in intracellular ­Ca2+ concentration This mechanism enables a high selectivity and specificity of CaM mediated-target activation, as it allows fine regulation of a great variety of biochemical processes such as cytoskeleton remodeling, cellular mobility, proliferation, apoptosis, ion transport and protein folding [7, 8].

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