Abstract

BackgroundIsothiocyanates (ITCs) are degradation products of the plant secondary metabolites glucosinolates (GSLs) and are known to affect human health as well as plant herbivores and pathogens. To investigate the processes engaged in plants upon exposure to isothiocyanate we performed a genome scale transcriptional profiling of Arabidopsis thaliana at different time points in response to an exogenous treatment with allyl-isothiocyanate.ResultsThe treatment triggered a substantial response with the expression of 431 genes affected (P < 0.05 and log2 ≥ 1 or ≤ -1) already after 30 min and that of 3915 genes affected after 9 h of exposure, most of the affected genes being upregulated. These are involved in a considerable number of different biological processes, some of which are described in detail: glucosinolate metabolism, sulphate uptake and assimilation, heat stress response, oxidative stress response, elicitor perception, plant defence and cell death mechanisms.ConclusionExposure of Arabidopsis thaliana to vapours of allyl-isothiocyanate triggered a rapid and substantial transcriptional response affecting numerous biological processes. These include multiple stress stimuli such as heat stress response and oxidative stress response, cell death and sulphur secondary defence metabolism. Hence, effects of isothiocyanates on plants previously reported in the literature were found to be regulated at the gene expression level. This opens some avenues for further investigations to decipher the molecular mechanisms underlying the effects of isothiocyanates on plants.Electronic supplementary materialThe online version of this article (doi:10.1186/s12864-016-3039-x) contains supplementary material, which is available to authorized users.

Highlights

  • Isothiocyanates (ITCs) are degradation products of the plant secondary metabolites glucosinolates (GSLs) and are known to affect human health as well as plant herbivores and pathogens

  • To assess the later A. thaliana response we chose a 9 h time point, after having performed pilot studies at different time points. Analysis at these three time points shows that the extent of the transcriptional response to the allyl-ITC treatment increased with the duration of exposure

  • At all three time points the majority of the affected genes were upregulated: 245 at

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Summary

Introduction

Isothiocyanates (ITCs) are degradation products of the plant secondary metabolites glucosinolates (GSLs) and are known to affect human health as well as plant herbivores and pathogens. Isothiocyanates (ITCs) are a group of chemicals that can be generated by certain plants when secondary metabolites called glucosinolates (GSLs) are degraded by the enzymatic activity of myrosinase. The role of ITCs in plant defence against insect pests and plant pathogens has been extensively studied. ITCs have been shown to lead to reduced insect growth and development, as well as reduced offspring [4]. They attract parasitoids of insect pests [5]. ITCs can lead to reduced bacterial proliferation and fungal growth [6, 7], the Kissen et al BMC Genomics (2016) 17:740 molecular mechanisms leading to these effects are largely unknown

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