Abstract

Bacteria in nature are known to survive for long periods under restricting conditions, mainly by reducing their growth rate and metabolic activity. Here, we uncover a novel strategy utilized by bacterial cells to resist aging by propagating rather than halting division. Bacterial aging was monitored by inspecting colonies of the Gram-positive soil bacterium Bacillus subtilis, which is capable of differentiating into various cell types under nutrient exhaustion. We revealed that after days of incubation, rejuvenating subpopulations, arrayed over the mother colony, emerged. These subpopulations were found to harbor mutations in a variety of genes, restricting the ability of the cells to differentiate. Surprisingly, even mutations that are not classically designated to developmental pathways, concluded in differentiation deficiency, indicating that multiple paths can reach this same outcome. We provide evidence that the evolved mutants continue to divide under conditions that favor entry into quiescence, hence becoming abundant within the aging population. The occurrence of such nondifferentiating mutants could impact bacterial population dynamics in natural niches.IMPORTANCE Until now, bacterial cells facing nutrient deprivation were shown to enter dormancy as a strategy to survive prolonged stress, with the most established examples being sporulation, stationary phase, and persistence. Here, we uncovered an opposing strategy for long-term bacterial survival, in which mutant subpopulations cope with a challenging niche by proliferating rather than by stalling division. We show that this feature stems from mutations in genes disturbing the capability of the cells to differentiate into a quiescent state, enabling them to divide under restrictive conditions. Our study challenges the dogma of bacterial aging by highlighting an additional survival strategy resembling that of cancerous cells in animal organs.

Highlights

  • Bacteria in nature are known to survive for long periods under restricting conditions, mainly by reducing their growth rate and metabolic activity

  • To initially characterize community features of the aging bacterial colony, we investigated the ratio between spores and nonsporulating cells during the course of 15 days

  • This is consistent with the mixture of spores and dividing cells previously observed in developing B. subtilis colonies that were prompted to sporulate [38]

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Summary

Introduction

Bacteria in nature are known to survive for long periods under restricting conditions, mainly by reducing their growth rate and metabolic activity. We uncovered an opposing strategy for long-term bacterial survival, in which mutant subpopulations cope with a challenging niche by proliferating rather than by stalling division We show that this feature stems from mutations in genes disturbing the capability of the cells to differentiate into a quiescent state, enabling them to divide under restrictive conditions. After prolonged exposure to starvation, bacteria can enter into long-term stationary phase, which is typically associated with global modulation of gene expression and metabolic activity [5,6,7,8,9] Phenotypes such as growth arrest, increased population heterogeneity, tolerance to antibiotics and oxidative stress, as well as an elevated mutation rate, were attributed to this phase [10,11,12,13,14,15]. The perseverance of various strategies to cope with nutrient limitation suggests that coexistence of a variety of differentiated cell types is needed for long-term species durability

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