Abstract

Scanning tunneling microscopy (STM) experiments and density-functional theory (DFT) calculations are combined to unravel the complex shifts and splittings of molecular orbitals (MOs) for the prototype system of a single $\ensuremath{\pi}$-conjugated molecule bonded to a semiconductor surface. Intramolecular resolution in STM images of 3,4,9,10-perylene tetracarboxylic dianhydride (PTCDA) on $\text{Si}(111)\text{\ensuremath{-}}(7\ifmmode\times\else\texttimes\fi{}7)$ cannot be understood as resulting from a simple rigid shift of the MOs of the free molecule. DFT calculations and simulations of STM images with realistic tips show large splittings of the original MOs that contribute in a complex way to the tunnel current and are understood under symmetry and charge-transfer arguments. The system is characterized by a strong, partially ionic covalent bonding involving the carboxyl groups of the PTCDA and the Si dangling bonds.

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