Adenine–Au and adenine–uracil–Au. Non-conventional hydrogen bonds of the anions and donator–acceptor properties of the neutrals

Abstract

This is a study of adenine–Au and adenine–uracil–Au (neutral, anionic and cationic), applying the B3LYP density-functional approach. In these systems, the interaction is directly related to the charge; so that as the metal atomic charge increases, the bond strength also increases. Neutral molecules are weakly bonded, the interaction in the case of cations is mainly electrostatic and in the case of the anions, the extra electron is localized on the metal atom and consequently, non-conventional hydrogen bonds are formed. In the case of adenine–Au (anion), the H dissociation energy is similar to the electron dissociation energy, and therefore both reactions may be possible. Moreover, the Au anionic atom modifies the hydrogen bonds of the uracil–adenine base pair. This may be significant in the study of point mutations that may occur in the Watson–Crick dimmer of nucleic basis. The electron-donator properties of these compounds are analyzed with the aid of the donator–acceptor map (DAM), previously described. Adenine–Au, uracil–Au and adenine–uracil–Au are more effective electron donors, but poorer electron acceptors than adenine, uracil and adenine–uracil. If the electron acceptor properties of carotenoids such as β-carotene and astaxanthin are compared, there are indications that astaxanthin may act as an oxidant instead of an antioxidant with the uracil–adenine base pair. The oxidation of nucleic acid bases by carotenoids may have important consequences, as oxidative damage of DNA and RNA appears to be linked to cancer. This is something that demands further studies and for this reason, work concerning the reactivity of carotenoids with DNA-nitrogen bases is in progress.