Abstract

In recent years, the role of epigenetics in the development and treatment of cancer has gained interest and the effects of internal and external factors on the epigenetic profile are under investigation. The term “epigenetics” refers to modifications that influence phenotype without altering genotype. Epigenetic changes are potentially reversible but generally stably maintained during the cell cycle. Since Feinberg et al. described differences in DNA methylation in human cancer in 1983 [66], several mechanisms of epigenetic control have been identified such as DNA methylation and histone modifications including acetylation, methylation and phosphorylation. Recently Seligson et al. reported that specific histone modification patterns are predictive of the risk of prostate cancer recurrence [183] and Fraga et al. showed that a profound disruption in histone modification patterns is a common feature of cancer [70]. Epigenetic abnormalities can be acquired during fetal development and during the course of a life contributing to common cancer risk in adults [65]. Recently Fraga et al. reported that, although monozygotic twins are epigenetically identical during the first years of life, the patterns of global and locus specific epigenetic modifications and gene expression patterns in monozygotic twin pairs diverge as they become older [70]. These differences could be explained by the influence of external factors such as smoking, physical activity and diet [17,61] as well as by accumu-

Highlights

  • In recent years, the role of epigenetics in the development and treatment of cancer has gained interest and the effects of internal and external factors on the epigenetic profile are under investigation

  • Other factors that are important for the response to HDAC inhibitors (HDACIs) include dose and duration of treatment and whether HDACIs are given in combination with other agents

  • HDACIs are competing with conventional chemotherapeutic drugs, and are favorable because of their low toxicities

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Summary

The diverse field of epigenetics

The role of epigenetics in the development and treatment of cancer has gained interest and the effects of internal and external factors on the epigenetic profile are under investigation. Fraga et al reported that, monozygotic twins are epigenetically identical during the first years of life, the patterns of global and locus specific epigenetic modifications and gene expression patterns in monozygotic twin pairs diverge as they become older [70] These differences could be explained by the influence of external factors such as smoking, physical activity and diet [17,61] as well as by accumu-. When Oudet et al provided the first images of repeating uniformly sized particles in DNA in 1975, they hypothesized that their observations might have a function in genomic expression Consistent with these predictions Boeger et al showed in 2003 that nucleosomes can unfold completely at transcriptionally active promoters [18]. An overview on the dynamic structure and function of chromatin has been published by Hansen in 2002 [89]

The histone code
Nucleosome dynamics and epigenetic modifications
Chromatin remodeling complexes and chromatin modification complexes
Chromatin-binding domains
Acetylation
Histone deacetylase inhibitors
Mechanisms of action
The cellular and biological effects of HDAC inhibitors
Activity in vitro of HDACIs
Activity in vivo
SIRT inhibitors
HAT regulation
HDACIs in clinical trials
Clinical toxicity and antitumor activity
Pharmacokinetics and pharmacodynamics
Biomarkers of evaluation
Schedule
Objective
10. Combination studies with HDACIs
Findings
11. Conclusion
Full Text
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