Abstract

BackgroundA novel multi-level pyramidal pooling residual U-Net with adversarial mechanism was proposed for organ segmentation from medical imaging, and was conducted on the challenging NIH Pancreas-CT dataset.MethodsThe 82 pancreatic contrast-enhanced abdominal CT volumes were split via four-fold cross validation to test the model performance. In order to achieve accurate segmentation, we firstly involved residual learning into an adversarial U-Net to achieve a better gradient information flow for improving segmentation performance. Then, we introduced a multi-level pyramidal pooling module (MLPP), where a novel pyramidal pooling was involved to gather contextual information for segmentation, then four groups of structures consisted of a different number of pyramidal pooling blocks were proposed to search for the structure with the optimal performance, and two types of pooling blocks were applied in the experimental section to further assess the robustness of MLPP for pancreas segmentation. For evaluation, Dice similarity coefficient (DSC) and recall were used as the metrics in this work.ResultsThe proposed method preceded the baseline network 5.30% and 6.16% on metrics DSC and recall, and achieved competitive results compared with the-state-of-art methods.ConclusionsOur algorithm showed great segmentation performance even on the particularly challenging pancreas dataset, this indicates that the proposed model is a satisfactory and promising segmentor.

Highlights

  • A novel multi-level pyramidal pooling residual U-Net with adversarial mechanism was proposed for organ segmentation from medical imaging, and was conducted on the challenging National Institutes of Health Clinical Center (NIH) Pancreas-CT dataset

  • Convolutional neural networks (CNNs) show great potential on organ segmentation tasks and various methods based on convolutional neural networks (CNNs) have been raised for pancreas segmentation [2,3,4,5,6,7,8,9,10,11,12,13,14]

  • Residual U‐Net with adversarial mechanism In order to verify the effectiveness of residual learning, we firstly compared our proposed adversarial U-Net with residual blocks to a conventional segmentation network U-Net [21] and an adversarial U-Net

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Summary

Introduction

A novel multi-level pyramidal pooling residual U-Net with adversarial mechanism was proposed for organ segmentation from medical imaging, and was conducted on the challenging NIH Pancreas-CT dataset. Oktay et al showed an attention gate model which is capable of automatically focusing on targets in medical imaging. The involvement of this attention gate into models conduces to suppressing irrelevant regions while highlighting useful features for a specific task. The U-Net model trained with the attention gate performs highly beneficial performance on 3D CT scans pancreas dataset [8]. These schemes indicate that the involvement of CNNs variants is effective for pancreas segmentation task

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