Abstract

A series of ribofuranosyl- and 2-deoxyribofuranosyl homo- and spacered-C-nucleosides have been synthesized by reaction of fully protected 3-(1-deoxy-β-D-ribofuranosyl-1-yl)propanal (1), 3-(1,2-dideoxy-β-D-ribofuranos-1-yl)propanal (14), 1-(1-desoxy-β-D-ribofuranos-1-yl)pent-4-yn- 3-on (19), 1-(1-desoxy-β-D-ribofuranos-1-yl)-5-phenyl-pent-4-yn-3-on (20), 1-(1,2-didesoxy-β- D-ribofuranos-1-yl)pent-4-yn-3-on (29), and 1-(1,2-didesoxy-β-D-ribofuranos-1-yl)-5-phenyl- pent-4-yn-3-on (30) with different nucleophiles. The preparation of 1 and 14 proceeds by Knoevenagel reaction with malononitrile, cyanoacetamide and 2-cyano-N-(4-methoxy- phenyl)acetamide and subsequent cyclization with sulphur to thiophenes 5, 7, 8, 16 and then by cyclization with triethyl orthoformate to give thienopyrimidine 6 and thienopyrimidinone 9, 10, and 17. Treatment of acetylenic ketones 19, 20, 29, and 30 with acetamidinium chloride, benzamidinium chloride, and S-methylisothiouronium sulphate provided the corresponding pyrimidines 21-26, 31, 32. Finally, the use of 4H-1,2,4-triazol-3-amine and 2-aminobenz- imidazole as 1,3-N,N'-dinucleophiles afforded the triazolopyrimidines 35, 39 and the pyrimidobenzimidazoles 36, 37, and 40, respectively. Deprotection of a selected number of C- nucleosides was achieved by one or two steps procedure without serious problems. That makes these C-nucleosides promising candidates for the synthesis of monomers suitable for solid phase nucleic acid oligomerization.

Highlights

  • The interest in nucleoside analogues is unbroken and their design and synthesis have been done with quite different intentions e.g. synthesis of homo-C-nucleosides with potential biological activity,[1,2,3] tools for elucidating the structural and functional properties of damaged DNA,[4] illustration of hybridizations and conformational changes of DNA and RNAs,[5] and to give an answer to the question why DNA evolved on Earth to have the structure that it does.[6,7,8,9,10]

  • Pursuing a program directed at the synthesis of homo-C-nucleosides, we have described previously an efficient route for the preparation of β-allyl C-glycosides of D-ribofuranose and 2deoxy-D-ribofuranose.[11]

  • In this contribution we present our results on transformation of the furnished aldehydes (1,14) and acetylenic ketones (19, 20, 29, 30) as versatile intermediates into a selected number of different heterocycles to make the synthetic potential of these precursors visible

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Summary

Introduction

The interest in nucleoside analogues is unbroken and their design and synthesis have been done with quite different intentions e.g. synthesis of homo-C-nucleosides with potential biological activity,[1,2,3] tools for elucidating the structural and functional properties of damaged DNA,[4] illustration of hybridizations and conformational changes of DNA and RNAs,[5] and to give an answer to the question why DNA evolved on Earth to have the structure that it does.[6,7,8,9,10]. In this contribution we present our results on transformation of the furnished aldehydes (1,14) and acetylenic ketones (19, 20, 29, 30) as versatile intermediates into a selected number of different heterocycles to make the synthetic potential of these precursors visible

Results and Discussion
NH2 S 2 NHR
R2 2 N 6 R1
10 N N 5 R
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