Abstract
Rheumatoid arthritis (RA) is a chronic polyarthritis of unknown etiology. To unravel the molecular mechanisms in RA, we performed targeted DNA sequencing analysis of patients with RA. This analysis identified a variant of the death receptor 3 (DR3) gene, a member of the family of apoptosis-inducing Fas genes, which contains four single-nucleotide polymorphisms (SNPs) and a 14-nucleotide deletion within exon 5 and intron 5. We found that the deletion causes the binding of splicing regulatory proteins to DR3 pre-mRNA intron 5, resulting in a portion of intron 5 becoming part of the coding sequence, thereby generating a premature stop codon. We also found that this truncated DR3 protein product lacks the death domain and forms a heterotrimer complex with wildtype DR3 that dominant-negatively inhibits ligand-induced apoptosis in lymphocytes. Myelocytes from transgenic mice expressing the human DR3 variant produced soluble truncated DR3, forming a complex with TNF-like ligand 1A (TL1A), which inhibited apoptosis induction. In summary, our results reveal that a DR3 splice variant that interferes with ligand-induced T cell responses and apoptosis may contribute to RA pathogenesis.
Highlights
Rheumatoid arthritis (RA) is a chronic polyarthritis of unknown etiology
Our results reveal that a death receptor 3 (DR3) splice variant that interferes with ligand-induced T cell responses and apoptosis may contribute to RA pathogenesis
We identified a DR3 polymorphism that is over-represented in patients with RA
Summary
We directly sequenced the entire DR3 genome of patients with RA, and found a variant of the DR3 gene that contains four single nucleotide polymorphisms (SNPs) and one 14-nucleotide deletion, which we termed polymorphisms a, c, d, e, and b We identified 100-, 70-, and 60-kDa nuclear proteins as three splicing factors: proline- and glutamine-rich (SFPQ), the heterogeneous nuclear ribonucleoprotein L (hnRNP L), and the nonPOU domain-containing octamer-binding protein (NONO), selectively bound to the variant intron 5 versus wildtype intron 5 (p Ͻ 0.05) encompassing SNPd (Fig. 2B). This would suggest a model in which mutation in the DR3 sequence lead to abnormal binding of splicing regulatory proteins to DR3 intron 5, thereby inducing pre-mRNA expression and insertion of a portion of intron 5 into the resulting mRNA product. Based on the mutations described above, truncated DR3 molecule lacking both death domain and transmembrane portion did assemble with the wildtype DR3 molecule to make a heterozygous trimmer complex
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