Abstract
The molecular mechanisms underlying innate immunity in the earthworm E. fetida remain unclear. For the recognition of innate immunity in the earthworm E. fetida, a detailed knowledge of this proteome is a prerequisite. The absence of a high-resolution E. fetida proteome map prompted us to determine E. fetida protein spots that can be visualised on 2-D protein gels. In this study, we present a preliminary description of the whole earthworm E. fetida proteome. A highly detailed two-dimensional gel electrophoresis (2-DE) map of the E. fetida proteome was established and approximately 1500 protein spots were detected from the earthworm sample when applying a 500 μg protein 2-DE in the pH range 3.0 - 10.0. We present a 2-DE proteome map of E. fetida, identifying 76 different proteins by matrix-assisted laser desorption/ionization-tandem time of flight mass spectrometry (MALDI-TOF/ TOF-MS) analysis. These identified proteins, including heat shock protein 90 (Hsp90), chaperonine protein HSP60, caspase-8, fibrinolytic protease 0, gelsolin-like protein, lombricine kinase, coelomic cytolytic factor1 (CCF 1), manganous superoxide dismutase (MnSOD), triosephosphate isomerase, extracellular globin-4, lysenin, and intermediate filament protein, glyceraldehyde-3- phosphate dehydrogenase, et al., are involved in several processes, including transcripttion, translation, the tricarboxylic acid cycle, the cellular amino acid metabolic process, protein amino acid phosphorylation, glycolysis, and the glucose metabolic process. These 2-DE data will enhance future comparisons of immunity, toxicology, biotic processes and other challenges, thereby allowing for further study of the molecular mechanisms in response to environmental stressors, and it will be useful to investigate environmental proteomics in invertebrate earthworms.
Highlights
As a key representative of soil fauna, earthworms are essential in maintaining soil fertility through their burrowing, ingestion, and excretion [1]
This study aims at creating a proteome reference map for to be used for the study of its ecotoxicoproteomics
Multiple 2-DE gels were acquired, and we present a 2-DE map of the earthworms E. fetida (Figure 1)
Summary
As a key representative of soil fauna, earthworms are essential in maintaining soil fertility through their burrowing, ingestion, and excretion [1]. Proteomics is a large-scale study of the proteins that gene transcription and translation, which provides direct measurement of protein expression levels and insight into the activity state of all relevant proteins [10]. There are only five research papers about proteomics of earthworm until now [11,12,13,14,15]. The key technologies of the proteome analysis are protein separation by 2-DE and mass spectrometric protein identification, which result in the efficient analysis of hundreds to thousands of proteins expressed in cells at one time [16]. The proteomics map of the earthworm E. fetida will provide information on earthworm proteomics that will be useful in our knowledge of the innate immunity, ecotoxicology, environmental science, et al
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