Abstract

Autism disorder, generally known as Autism Spectrum Disorder (ASD) is a brain disorder characterized by lack of communication skills, social aloofness and repetitions in the actions in the patients, which is affecting millions of the people across the globe. Accurate identification of autistic patients is considered a challenging task in the domain of brain disorder science. To address this problem, we have proposed a three-stage feature selection approach for the classification of ASD on the preprocessed Autism Brain Imaging Data Exchange (ABIDE) rs-fMRI Dataset. In the first stage, a large neural network which we call a “Teacher ” was trained on the correlation-based connectivity matrix to learn the latent representation of the input. In the second stage an autoencoder which we call a “Student” autoencoder was given the task to learn those trained “Teacher” embeddings using the connectivity matrix input. Lastly, an SFFS-based algorithm was employed to select the subset of most discriminating features between the autistic and healthy controls. On the combined site data across 17 sites, we achieved the maximum 10-fold accuracy of 82% and for the individual site-wise data, based on 5-fold accuracy, our results outperformed other state of the art methods in 13 out of the total 17 site-wise comparisons.

Highlights

  • The human brain is considered the most complex organ in the body due to it’s structural and functional variations across the temporal and spatial domain, variety of cognitive functions based on the interaction of functional regions and the intrinsic modularity that is present in those regions [1].there are influential studies that have shown the existence of small-world-networks [2], modular networks [3] and hierarchical organization of the different modules [4] in the human brain but still much needs to be done in the field of brain sciences to grasp the complexity of the brain

  • Our contribution in this study has three key characteristics, (i) first we used the 3-Stage Teacher, Student and sequential forward feature selection (SFFS) based feature selection approach, which is a novel idea for the Functional Magnetic Resonance Imaging (fMRI) domain, (ii) our features are of a short size and are verifiable from the supplementary material which is mentioned in our study and lastly we have outperformed several state of the art algorithms in the literature which validates the effectiveness and usefulness of our work

  • We have used Autism Spectrum Disorder (ASD) preprocessed dataset from the Autism Brain Imaging Data Exchange (ABIDE) [52] consortium where data from 17 sites with phenotypic information related to age, sex and Autism Diagnostic Observation Schedule (ADOS) [53] scores are maintained in a pre-preprocessed state for researchers

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Summary

Introduction

The human brain is considered the most complex organ in the body due to it’s structural and functional variations across the temporal and spatial domain, variety of cognitive functions based on the interaction of functional regions and the intrinsic modularity that is present in those regions [1].there are influential studies that have shown the existence of small-world-networks [2], modular networks [3] and hierarchical organization of the different modules [4] in the human brain but still much needs to be done in the field of brain sciences to grasp the complexity of the brain. More recent studies have proved that the gender factor has significance in ASD and cannot be taken as a trivial issue. In this regard meta-analysis of 54 studies with a combined size population of 13,784,284 discovered that among the 53,712 participants that had ASD, male population of 43,972 and female of 9740 were found to have ASD resulting in 3:1 prevalence in the males as compared to females, thereby, providing strong evidence that autism more likely affects men [10] and verifying an earlier work which found that autism was more common among men [11]

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