Abstract

The C-terminus of the voltage-gated calcium channel Cav1.2 encodes a transcription factor, the calcium channel associated transcriptional regulator (CCAT), that regulates neurite extension and inhibits Cav1.2 expression. The mechanisms by which CCAT is generated in neurons and myocytes are poorly understood. Here we show that CCAT is produced by activation of a cryptic promoter in exon 46 of CACNA1C, the gene that encodes CaV1.2. Expression of CCAT is independent of Cav1.2 expression in neuroblastoma cells, in mice, and in human neurons derived from induced pluripotent stem cells (iPSCs), providing strong evidence that CCAT is not generated by cleavage of CaV1.2. Analysis of the transcriptional start sites in CACNA1C and immune-blotting for channel proteins indicate that multiple proteins are generated from the 3′ end of the CACNA1C gene. This study provides new insights into the regulation of CACNA1C, and provides an example of how exonic promoters contribute to the complexity of mammalian genomes.

Highlights

  • Voltage-gated calcium channels are central regulators of signaling and gene expression in the nervous system

  • This transcriptional regulation can be mediated by influencing the function of transcription factors like CREB, NFAT, and MEF2 [3,4,5,6,7], or by the activity of channel associated transcriptional regulator (CCAT), a transcription factor encoded within its C-terminal domain

  • We provide evidence supporting that CCAT is produced not by cleavage of the Cav1.2 channel protein but by an internal promoter in the CACNA1C gene that drives expression of exons 46 and 47 independently

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Summary

Introduction

Voltage-gated calcium channels are central regulators of signaling and gene expression in the nervous system. The Ltype calcium channel Cav1.2 is effective at regulating gene expression in response to depolarization [1,2] This transcriptional regulation can be mediated by influencing the function of transcription factors like CREB, NFAT, and MEF2 [3,4,5,6,7], or by the activity of CCAT, a transcription factor encoded within its C-terminal domain. A putative cleavage site on the C-terminus of Cav1.1, the L-type channel in skeletal muscle, has been identified using mass spectrometry [10]. It is not clear, if a similar mechanism is responsible for generating CCAT in neurons

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