Abstract

Pleckstrin homology (PH) domains are found in many proteins involved in signal transduction, including the family of large molecular mass phosphatidylinositol (PI) 4-kinases. Although the exact function of these newly discovered domains is unknown, it is recognized that they may influence enzyme regulation by binding different ligands. In this study, the recombinant PI 4-kinase PH domain was explored for its ability to bind to different phospholipids. First, we isolated partial cDNAs of the >7-kilobase transcripts of PI 4-kinases from carrot (DcPI4Kalpha) and Arabidopsis (AtPI4Kalpha). The deduced primary sequences were 41% identical and 68% similar to rat and human PI 4-kinases and contained the telltale lipid kinase unique domain, PH domain, and catalytic domain. Antibodies raised against the expressed lipid kinase unique, PH, and catalytic domains identified a polypeptide of 205 kDa in Arabidopsis microsomes and an F-actin-enriched fraction from carrot cells. The 205-kDa immunoaffinity-purified Arabidopsis protein had PI 4-kinase activity. We have used the expressed PH domain to characterize lipid binding properties. The recombinant PH domain selectively bound to phosphatidylinositol 4-monophosphate (PI-4-P), phosphatidylinositol 4,5-bisphosphate (PI-4,5-P2), and phosphatidic acid and did not bind to the 3-phosphoinositides. The PH domain had the highest affinity for PI-4-P, the product of the reaction. Consideration is given to the potential impact that this has on cytoskeletal organization and the PI signaling pathway in cells that have a high PI-4-P/PI-4,5-P2 ratio.

Highlights

  • Since the first report of changes in phosphoinositide metabolism in response to light [1], there have been many studies of the metabolism of inositol phospholipids in plants [2,3,4]

  • One explanation that we are exploring for these differences is that the synthesis of PI-4,5-P2 is rate-limiting in plant cells because phosphatidylinositol 4-monophosphate (PI-4-P) is sequestered by cytoskeletal or other proteins and not readily available for phosphorylation to PI-4,5-P2 or other metabolic pathways

  • The 5Ј-rapid amplification of cDNA ends (RACE) product contained 1.4 kb and had sequence homology to the lipid kinase unique domain and Pleckstrin homology (PH) domain of the other PI 4-kinases reported in GenBankTM

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Summary

Introduction

Since the first report of changes in phosphoinositide metabolism in response to light [1], there have been many studies of the metabolism of inositol phospholipids in plants [2,3,4]. These studies reveal two distinguishing features of phosphoinositide metabolism in higher plants: 1) [3H]PI-4-P1 is 10 –20-fold. A putative PI-4-P 5-kinase was cloned from Arabidopsis [13], but the genes encoding PI 4-kinases in plants have remained elusive. The second type encodes a larger protein of ϳ200 –230 kDa that is membrane-associated [19, 22]

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