Abstract

BackgroundTo dissect the genetic causes underlying diminished ovarian reserve (DOR) and premature ovarian insufficiency (POI) within a family.MethodsWhole-exome sequencing of the proband was performed and DOR and Sanger sequencing was carried out to validate presence of the variant in the proband and her mother. In silico algorithms were used to analyze the mutational effect of the variant. PSIPRED (PSI-blast based secondary structure PREDiction) was used for predicting mutated protein secondary structures.ResultsUsing whole-exome sequencing, we found that the proband carries the mutation c.2525A > C;p.Q842P in EIF4ENIF, a POI-related gene. Through Sanger sequencing, we found that the proband’s mother also carries the same mutation. Online bioinformatics analysis suggests that the mutation is a pathogenic mutation. Secondary structural biology prediction analysis indicates that the mutation either causes the destruction of the α-helical structure around the mutation site or reduces the α-helix.ConclusionsThis mutation is the second novel mutation of EIF4ENIF1 that has been identified in POI patients. This study thus provides a theoretical basis for POI genetics and POI clinical genetic counseling.

Highlights

  • To dissect the genetic causes underlying diminished ovarian reserve (DOR) and premature ovarian insufficiency (POI) within a family

  • Whole-exome sequencing (WES) analysis of the proband and sanger sequencing validation The proband was diagnosed with DOR, while her mother was diagnosed with POI, suggesting that genetic factors may play an important role in observed ovarian disfunction

  • WES data was filtered to retain frameshift, splice-site, missense, and nonsense variants while excluding variants with allele frequencies > 1% in the whole-exome or whole-genome databases (ExAC, gnomAD, ESP6500, and 1000 Genomes). This led to identification of the variant c.2525A > C;p.Q842P in the POI-related gene EIF4ENIF1, which had previously been associated with POI in a study analyzing a large pedigree [20]

Read more

Summary

Introduction

To dissect the genetic causes underlying diminished ovarian reserve (DOR) and premature ovarian insufficiency (POI) within a family. The pathogenic molecular mechanism of POI has been thought involve mutations in genes involved in several developmental processes, including primordial germ cell survival [4], DNA repair and meiotic recombination [5,6,7,8,9,10,11,12], oocyte transcription and translational control during folliculogenesis [13,14,15,16,17,18,19,20], granulosa cell development [21,22,23,24,25], and oocyte mitochondrial function [26, 27]. EIF4ENIF1 is a good candidate gene for investigation to determine its role in POI and ovarian reserve abnormalities

Methods
Results
Discussion
Conclusion
Full Text
Published version (Free)

Talk to us

Join us for a 30 min session where you can share your feedback and ask us any queries you have

Schedule a call