Abstract

A thermophilic lipolytic bacterium identified as Bacillus sp. L2 via 16S rDNA was previously isolated from a hot spring in Perak, Malaysia. Bacillus sp. L2 was confirmed to be in Group 5 of bacterial classification, a phylogenically and phenotypically coherent group of thermophilic bacilli displaying very high similarity among their 16S rRNA sequences (98.5–99.2%). Polymerase chain reaction (PCR) cloning of L2 lipase gene was conducted by using five different primers. Sequence analysis of the L2 lipase gene revealed an open reading frame (ORF) of 1251 bp that codes for 417 amino acids. The signal peptides consist of 28 amino acids. The mature protein is made of 388 amino acid residues. Recombinant lipase was successfully overexpressed with a 178-fold increase in activity compared to crude native L2 lipase. The recombinant L2 lipase (43.2 kDa) was purified to homogeneity in a single chromatography step. The purified lipase was found to be reactive at a temperature range of 55–80 °C and at a pH of 6–10. The L2 lipase had a melting temperature (Tm) of 59.04 °C when analyzed by circular dichroism (CD) spectroscopy studies. The optimum activity was found to be at 70 °C and pH 9. Lipase L2 was strongly inhibited by ethylenediaminetetraacetic acid (EDTA) (100%), whereas phenylmethylsulfonyl fluoride (PMSF), pepstatin-A, 2-mercaptoethanol and dithiothreitol (DTT) inhibited the enzyme by over 40%. The CD spectra of secondary structure analysis showed that the L2 lipase structure contained 38.6% α-helices, 2.2% ß-strands, 23.6% turns and 35.6% random conformations.

Highlights

  • Lipolytic enzymes are currently attracting significant attention because of their biotechnological potential

  • Lipase L2 was strongly inhibited by ethylenediaminetetraacetic acid (EDTA) (100%), whereas phenylmethylsulfonyl fluoride (PMSF), pepstatin-A, 2-mercaptoethanol and dithiothreitol (DTT) inhibited the enzyme by over 40%

  • We described a method for the rapid cloning of the lipase gene from thermophilic Bacillus sp

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Summary

Introduction

Lipolytic enzymes are currently attracting significant attention because of their biotechnological potential. Most of the lipases used in industry are microbial enzymes, of both fungal and bacterial origin [1]. Lipases are an important group of enzymes both physiologically and commercially as the use of lipases for a variety of biotechnological applications is rapidly and steadily increasing [2]. Lipases have promising applications in organic chemical processing, detergent formulation, synthesis of biosurfactants, the agrochemical industry, paper manufacture, nutrition, cosmetics and pharmaceutical processing [3]. Thermostability is a desirable characteristic because it may allow the enzyme to endure conditions in industrial processes that use relatively high temperatures and/or organic solvents. L2 using a set of consensus primers and Polymerase chain reaction (PCR) techniques, followed by expression and purification of the recombinant L2 lipase gene, and some properties of the purified enzyme including the circular dichroism (CD) spectroscopy studies

Bacterial Identification
Isolation and PCR Cloning of the Thermostable L2 Lipase Gene
Sequence Analysis of the Thermostable L2 Lipase
Overexpression of the L2 Lipase Gene
Purification of Recombinant L2 Lipase
Effect of pH on Lipase Activity and Stability
Effect of Temperature on Activity and Thermostability Profile
Denatured Protein Analysis of L2 Lipase
Effect of Metal Ions on Lipase Activity
2.10. Influence of Various Effectors on L2 Lipase Activity
Experimental Section
Nucleic Acid Manipulation
Phylogenetic Tree Analysis
Isolation of the Lipase Gene
Cloning of PCR Product
Sequencing of the Thermostable Lipase Gene
Expression of the L2 Lipase Gene
Assay of Lipase Activity
3.11. Time-Course Analysis of Crude Lipase Expression
3.12. Purification of Recombinant Lipase L2
3.13. SDS-PAGE Analysis of Bacterial Protein
3.14. Effect of pH on Lipase Activity and Stability
3.15. Effect of Temperature on Lipase Activity and Stability
3.16. Denatured Protein Analysis
3.17. Effect of Metal Ions on Lipase Activity
3.18. Influence of Various Effectors on Lipase Activity
Conclusions
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