Abstract

The docking of the HIV-1 capsid at the nuclear pore complex, penetration of the viral capsid, and subsequent nuclear uncoating kinetics are critical HIV host-cell interactions that are yet to be understood. A particular challenge in this regard, is the computational modeling of the nuclear pore complex (NPC), a large macromolecular complex in the cell that regulates transport into and out of the nucleus. Computer simulations of complete nuclear pore complex can provide theoretical insights into large-scale viral processes pertaining to capsid entry.

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