Abstract

Over the last two decades, the evidence has been growing that in addition to epileptic spikes high frequency oscillations (HFOs) are important biomarkers of epileptogenic tissue. New methods of artificial intelligence such as deep learning neural networks can provide additional tools for automated analysis of EEG. Here we present a Long Short-Term Memory neural network for detection of spikes, ripples and ripples-on-spikes (RonS). We used intracranial EEG (iEEG) from two independent datasets. First dataset (7 patients) was used for network training and testing. The second dataset (5 patients) was used for cross-institutional validation. 1000 events of each class (spike, RonS, ripple and baseline) were selected from the candidates initially found using a novel threshold method. Network training was performed using random selections of 50–500 events (per class) from all patients from the 1st dataset. This ‘global’ network was then tested on other events for each patient from both datasets. The network was able to detect events with a good generalisability namely, with total accuracy and specificity for each class exceeding 90% in all cases, and sensitivity less than 86% in only two cases (82.5% for spikes in one patient and 81.9% for ripples in another patient). The deep learning networks can significantly accelerate the analysis of iEEG data and increase their diagnostic value which may improve surgical outcome in patients with localization-related intractable epilepsy.

Highlights

  • Over the last two decades, the evidence has been growing that in addition to epileptic spikes high frequency oscillations (HFOs) are important biomarkers of epileptogenic tissue

  • All patients were diagnosed with localization-related epilepsy and had typical focal impaired awareness seizures (FIAS) with focal to bilateral tonic-clonic seizures (FBTCS) in two patients (ILAE 2017 seizure classification21)

  • The problem with spikes is that highpass filtering of a spike produces a burst of high frequency oscillations which can be mistakenly marked as ripple resulting in a false positive error for ripples and RonS events

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Summary

Introduction

Over the last two decades, the evidence has been growing that in addition to epileptic spikes high frequency oscillations (HFOs) are important biomarkers of epileptogenic tissue. Several research groups have argued that detection and quantitative www.nature.com/scientificreports analysis of ripples and fast ripples is necessary for a more accurate localization of epileptogenic tissue which may improve surgical outcome in patients with localization-related intractable epilepsy[5,6,7,8,9,10,11,12,13] Despite their promise as a new biomarker of epileptogenic tissue, the implementation of quantitative evaluation of HFOs into clinical practice remains a challenging task due to the technical difficulties to detect those types of electrical activity. The LSTM network was first developed by Hochreiter and Schmidhuber[20] as a special type of the deep neural network architecture being able to correlate stimuli/events separated by time and to learn long-term dependencies in the input signal. These gates determine the cell learning rate, can solve the problem of vanishing gradients and provide a better control of what information is kept or forgotten across longer times

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