Abstract

Adenosine 5′ triphosphate (ATP) is a universal intracellular energy source and an evolutionarily ancient, ubiquitous extracellular signal in diverse species. Here, we report the generation and characterization of single-wavelength genetically encoded fluorescent sensors (iATPSnFRs) for imaging extracellular and cytosolic ATP from insertion of circularly permuted superfolder GFP into the epsilon subunit of F0F1-ATPase from Bacillus PS3. On the cell surface and within the cytosol, iATPSnFR1.0 responds to relevant ATP concentrations (30 μM to 3 mM) with fast increases in fluorescence. iATPSnFRs can be genetically targeted to specific cell types and sub-cellular compartments, imaged with standard light microscopes, do not respond to other nucleotides and nucleosides, and when fused with a red fluorescent protein function as ratiometric indicators. After careful consideration of their modest pH sensitivity, iATPSnFRs represent promising reagents for imaging ATP in the extracellular space and within cells during a variety of settings, and for further application-specific refinements.

Highlights

  • Adenosine 5′ triphosphate (ATP) is a universal intracellular energy source and an evolutionarily ancient, ubiquitous extracellular signal in diverse species

  • After unsuccessful attempts to modify ATP-gated P2X receptors[33] and the bacterial regulatory protein GlnK1 to suit our needs, we turned to microbial F0F1-ATP synthase epsilon subunits[34], which have been adapted to create the fluorescence resonance energy transfer (FRET) sensor ATeam[22] and the excitation ratio sensor QUEEN22,23, upon which our sensors are based

  • We used the bright, stable circularly permuted superfolder GFP36 (cpSFGFP) scaffold, rational design, and library screening to direct the selection of ATP sensors with desired characteristics

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Summary

Introduction

Adenosine 5′ triphosphate (ATP) is a universal intracellular energy source and an evolutionarily ancient, ubiquitous extracellular signal in diverse species. Luciferase’s bioluminescent output yields low photon fluxes and limits cellular-scale resolution imaging Despite these potential limitations, several pioneering studies have successfully used genetically targeted luciferase-based probes to image ATP dynamics and this remains a useful approach in the purinergic signaling and intracellular ATP homeostasis fields[16,17,18,19]. FRET, which would require excitation at 442 nm for imaging YFP emission: 442 nm lasers are not standard on confocal microscopes and CFP in the existing sensors has one of the lowest quantum yields of the available GFP-based proteins This would translate to inefficient energy transfer from the donor’s excited state to the acceptor by dipole–dipole coupling. We report a GFP-based genetically encoded single-wavelength sensor for imaging cytosolic and cell surface ATP

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