Abstract

Encephalomyocarditis virus (EMCV) is a picornavirus that produces lytic infections in murine and human cells. Employing a genome-wide CRISPR-Cas9 knockout screen to find host factors required for EMCV infection, we identified a role for ADAM9 in EMCV infection. CRISPR-mediated deletion of ADAM9 in multiple human cell lines rendered the cells highly resistant to EMCV infection and cell death. Primary fibroblasts from ADAM9 KO mice were also strongly resistant to EMCV infection and cell death. In contrast, ADAM9 KO and WT cells were equally susceptible to infection with other viruses, including the picornavirus Coxsackie virus B. ADAM9 KO cells failed to produce viral progeny when incubated with EMCV. However, bypassing EMCV entry into cells through delivery of viral RNA directly to the cytosol yielded infectious EMCV virions from ADAM9 KO cells, suggesting that ADAM9 is not required for EMCV replication post-entry. These findings establish that ADAM9 is required for the early stage of EMCV infection, likely for virus entry or viral genome delivery to the cytosol.IMPORTANCE Viral myocarditis is a leading cause of death in the United States, contributing to numerous unexplained deaths in people ≤35 years old. Enteroviruses contribute to many cases of human myocarditis. Encephalomyocarditis virus (EMCV) infection causes viral myocarditis in rodent models, but its receptor requirements have not been fully identified. CRISPR-Cas9 screens can identify host dependency factors essential for EMCV infection and enhance our understanding of key events that follow viral infection, potentially leading to new strategies for preventing viral myocarditis. Using a CRISPR-Cas9 screen, we identified adisintegrin and metalloproteinase 9 domain (ADAM9) as a major factor required for the early stages of EMCV infection in both human and murine infection.

Highlights

  • Encephalomyocarditis virus (EMCV) is a picornavirus that produces lytic infections in murine and human cells

  • The rapid lysis of HeLa cells with EMCV infection allowed us to screen for EMCV dependency factor (EDF) using pooled single-guide RNAs since we could identify such mutant cells by their resistance to EMCV-induced cell death, i.e., these mutants would no longer be susceptible to EMCV infection and would survive EMCV challenge

  • When receptor-mediated cell entry is bypassed by transfection of infectious viral RNA (vRNA) directly into the cell, EMCV is capable of replicating in both WT and a disintegrin and metalloproteinase 9 domain (ADAM9) KO cells (Fig. 4B). These results demonstrate that ADAM9 is not directly involved in EMCV replication steps post-entry but rather facilitates EMCV entry and/or genome delivery into the cell where EMCV vRNA genomes are replicated in an ADAM9-independent manner

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Summary

Introduction

Encephalomyocarditis virus (EMCV) is a picornavirus that produces lytic infections in murine and human cells. Employing a genome-wide CRISPR-Cas knockout screen to find host factors required for EMCV infection, we identified a role for ADAM9 in EMCV infection. Encephalomyocarditis virus (EMCV) infection causes viral myocarditis in rodent models, but its receptor requirements have not been fully identified. CRISPR-Cas screens can identify host dependency factors essential for EMCV infection and enhance our understanding of key events that follow viral infection, potentially leading to new strategies for preventing viral myocarditis. Using a CRISPR-Cas screen, we identified a disintegrin and metalloproteinase 9 domain (ADAM9) as a major factor required for the early stages of EMCV infection in both human and murine infection. Using a genome-wide CRISPR-Cas screen, we identified ADAM9 as a major EMCV dependency factor (EDF). This study demonstrates that ADAM9 functions as a major EDF involved in the early infection of both human and murine cells

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