Abstract

The infective SARS-CoV-2 is more prone to immune escape. Presently, the significant variants of SARS-CoV-2 are emerging in due course of time with substantial mutations, having the immune escape property. Simultaneously, the vaccination drive against this virus is in progress worldwide. However, vaccine evasion has been noted by some of the newly emerging variants. Our review provides an overview of the emerging variants’ immune escape and vaccine escape ability. We have illustrated a broad view related to viral evolution, variants, and immune escape ability. Subsequently, different immune escape approaches of SARS-CoV-2 have been discussed. Different innate immune escape strategies adopted by the SARS-CoV-2 has been discussed like, IFN-I production dysregulation, cytokines related immune escape, immune escape associated with dendritic cell function and macrophages, natural killer cells and neutrophils related immune escape, PRRs associated immune evasion, and NLRP3 inflammasome associated immune evasion. Simultaneously we have discussed the significant mutations related to emerging variants and immune escape, such as mutations in the RBD region (N439K, L452R, E484K, N501Y, K444R) and other parts (D614G, P681R) of the S-glycoprotein. Mutations in other locations such as NSP1, NSP3, NSP6, ORF3, and ORF8 have also been discussed. Finally, we have illustrated the emerging variants’ partial vaccine (BioNTech/Pfizer mRNA/Oxford-AstraZeneca/BBIBP-CorV/ZF2001/Moderna mRNA/Johnson & Johnson vaccine) escape ability. This review will help gain in-depth knowledge related to immune escape, antibody escape, and partial vaccine escape ability of the virus and assist in controlling the current pandemic and prepare for the next.

Highlights

  • After detecting SARS-CoV-2 in Wuhan, the world is currently passing through a very crucial pandemic station

  • The development of vaccines for COVID-19 is a unique success story in medical science and molecular biology, and it is an excellent example of collaboration and teamwork between researchers [277]

  • Emerging variants are developing throughout the globe, which is more challenging in this scenario

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Summary

INTRODUCTION

After detecting SARS-CoV-2 in Wuhan, the world is currently passing through a very crucial pandemic station. This occurrence is one of the significant barriers to antiviral therapy and vaccine development During this pandemic, the researcher has observed the emergence of SARSCoV-2 variants rapidly through evolution. The researcher has observed the emergence of SARSCoV-2 variants rapidly through evolution Some of these variants are associated with the appearance of immune escape. SARSCoV-2 mutants are dominant strains in several regions of the world Some mutations of these variants are related to immune escape or partial vaccine escape of SARS-CoV-2. We have discussed the significant mutations in emerging variants for immune escape. In this direction, we illustrated the mutations in the RBD region (N439K, L452R, E484K, N501Y, K444R) and other regions (D614G, P681R) of the S-glycoprotein. Majumdar and Niyogi described the different mutations of SARS-CoV-2 and the implications of the mutations on viral fitness [75]

SARS-CoV-2 AND DIFFERENT IMMUNE ESCAPE STRATEGIES
Innate Immune Escape Approaches of SARS-CoV-2
Cytokines and Immune Escape
DC Function and Immune
Macrophages and Immune Escape
NK Cells and Immune
Neutrophils and Immune Escape
Pattern-Recognition Receptors (PRRs) and Immune Escape
NLRP3 Inflammasome and Immune
SIGNIFICANT MUTATIONS IN EMERGING VARIANTS AND IMMUNE ESCAPE
Mutation in RBD
L452R Another significant mutation noted in the RBD region is L452R
Y453F The Y453F mutation is also significant in the RBD region of Sglycoprotein
K444R Three mutants were identified at 444 positions in the RBD region
Mutations in Other Regions
Mutations in NSP6 Several mutations were observed in the NSP6 region
Mutations in ORF8 Region Some mutations are reported in the ORF8 region
ANTIBODY ESCAPE
Antibody Domains Against SARS-CoV-2
PARTIAL VACCINE ESCAPE
13. WIBP-CorV
14. QazCovid-in
Oxford-AstraZeneca Vaccine
BBIBP-CorV Vaccine and ZF2001 Vaccine
Moderna mRNA Vaccine (mRNA-1273) and Johnson & Johnson Vaccine (Janssen)
T CELL RESPONSES AGAINST SARS-CoV-2 VARIANTS
10 ARRIVAL OF IMMENSELY MUTATED OMICRON VARIANT
11 LIMITATIONS
Findings
12 CONCLUSION
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