Abstract
Dna2 is a nuclease and helicase that functions redundantly with other proteins in Okazaki fragment processing, double-strand break resection, and checkpoint kinase activation. Dna2 is an essential enzyme, required for yeast and mammalian cell viability. Here, we report that numerous mutations affecting the DNA damage checkpoint suppress dna2∆ lethality in Saccharomyces cerevisiae. dna2∆ cells are also suppressed by deletion of helicases PIF1 and MPH1, and by deletion of POL32, a subunit of DNA polymerase δ. All dna2∆ cells are temperature sensitive, have telomere length defects, and low levels of telomeric 3′ single-stranded DNA (ssDNA). Interestingly, Rfa1, a subunit of the major ssDNA binding protein RPA, and the telomere-specific ssDNA binding protein Cdc13, often colocalize in dna2∆ cells. This suggests that telomeric defects often occur in dna2∆ cells. There are several plausible explanations for why the most critical function of Dna2 is at telomeres. Telomeres modulate the DNA damage response at chromosome ends, inhibiting resection, ligation, and cell-cycle arrest. We suggest that Dna2 nuclease activity contributes to modulating the DNA damage response at telomeres by removing telomeric C-rich ssDNA and thus preventing checkpoint activation.
Highlights
Dna2 is a nuclease and helicase that functions redundantly with other proteins in Okazaki fragment processing, doublestrand break resection, and checkpoint kinase activation
We find that deletion of numerous DNA damage checkpoint mutations, all affecting responses to RPA-coated single-stranded DNA (ssDNA), as well as deletions of Pif1 and Mph1 helicases, and Pol32, a subunit of Pol d, suppress dna2D to a similar extent
We propose that the critical function of Dna2 is removing RPA-coated, 59 C-rich, ssDNA at telomeres
Summary
Marta Markiewicz-Potoczny,* Michael Lisby,† and David Lydall*,1 *Institute for Cell and Molecular Biosciences, The Medical School, Newcastle University, Newcastle upon Tyne NE2 4HH, United. Kingdom and †Department of Biology, University of Copenhagen, DK-2200, Denmark ORCID IDs: 0000-0002-3586-6977 (M.M.-P.); 0000-0002-4830-5247 (M.L.); 0000-0003-2478-085X (D.L.)
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