Abstract

Cancer is a globally recognized cause of death. A proper cancer analysis demands the classification of several types of tumor. Investigations into microarray gene expressions seem to be a successful platform for revising genetic diseases. Although the standard machine learning (ML) approaches have been efficient in the realization of significant genes and in the classification of new types of cancer cases, their medical and logical application has faced several drawbacks such as DNA microarray data analysis limitation, which includes an incredible number of features and the relatively small size of an instance. To achieve a reasonable and efficient DNA microarray dataset information, there is a need to extend the level of interpretability and forecast approach while maintaining a great level of precision. In this work, a novel way of cancer classification based on based gene expression profiles is presented. This method is a combination of both Firefly algorithm and Mutual Information Method. First, the features are used to select the features before using the Firefly algorithm for feature reduction. Finally, the Support Vector Machine is used to classify cancer into types. The performance of the proposed system was evaluated by using it to classify datasets from colon cancer; the results of the evaluation were compared with some recent approaches.

Highlights

  • Cancer is a term that refers to diseases that result from an uncontrolled body cell division

  • A proper identification of cancer is necessary for its medical diagnosis; it is necessary for an effective treatment and minimization of toxicity on patients

  • This study presents a new approach for the analysis of microarray datasets and for an efficient classification of cancer[26], [27]

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Summary

Introduction

Cancer is a term that refers to diseases that result from an uncontrolled body cell division. PEN Vol 7, No 3, September 2019, pp.1152- 1162 observe the level of expression of several genes [3] and have facilitated the ascent of computational analysis, including ML techniques These techniques are useful for pattern extraction and classification model development from the gene expression database; they have been helpful in cancers prognosis and management[4]. DNA microarray technologies have found application in the prediction of cancer diseases and have served as an effective platform for gene expression analysis in several experimental studies. Feature selection is an optimization problem; a well-organized process of discriminative gene selection from microarray gene expression data for cancers, diagnosis has been recommended. This study presents a new approach for the analysis of microarray datasets and for an efficient classification of cancer[26], [27].

Overview
Mutual Information
The Proposed Algorithm
BFA Initialization
Updating the position of the best firefly
Results and Discussion
Experimental Settings
Method
Conclusion
Full Text
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